CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004863
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA-directed RNA polymerase subunit alpha 
Protein Synonyms/Alias
 RNAP subunit alpha; RNA polymerase subunit alpha; Transcriptase subunit alpha 
Gene Name
 rpoA 
Gene Synonyms/Alias
 BSU01430 
Created Date
 July 27, 2013 
Organism
 Bacillus subtilis (strain 168) 
NCBI Taxa ID
 224308 
Lysine Modification
Position
Peptide
Type
References
207TDGSTGPKEAIALGSacetylation[1]
240HAEIMVEKEEDQKEKacetylation[1]
Reference
 [1] The acetylproteome of Gram-positive model bacterium Bacillus subtilis.
 Kim D, Yu BJ, Kim JA, Lee YJ, Choi SG, Kang S, Pan JG.
 Proteomics. 2013 May;13(10-11):1726-36. [PMID: 23468065
Functional Description
 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. 
Sequence Annotation
 REGION 1 228 Alpha N-terminal domain (alpha-NTD) (By
 REGION 245 314 Alpha C-terminal domain (alpha-CTD) (By  
Keyword
 3D-structure; Complete proteome; DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome; Transcription; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 314 AA 
Protein Sequence
MIEIEKPKIE TVEISDDAKF GKFVVEPLER GYGTTLGNSL RRILLSSLPG AAVTSIQIDG 60
VLHEFSTIEG VVEDVTTIIL HIKKLALKIY SDEEKTLEID VQGEGTVTAA DITHDSDVEI 120
LNPDLHIATL GENASFRVRL TAQRGRGYTP ADANKRDDQP IGVIPIDSIY TPVSRVSYQV 180
ENTRVGQVAN YDKLTLDVWT DGSTGPKEAI ALGSKILTEH LNIFVGLTDE AQHAEIMVEK 240
EEDQKEKVLE MTIEELDLSV RSYNCLKRAG INTVQELANK TEEDMMKVRN LGRKSLEEVK 300
AKLEELGLGL RKDD 314 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:HAMAP.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:HAMAP.
 GO:0006351; P:transcription, DNA-dependent; IEA:HAMAP. 
Interpro
 IPR011261; DNA-dir_RNA_pol_dimersation.
 IPR011262; DNA-dir_RNA_pol_insert.
 IPR009025; DNA-dir_RNA_pol_RBP11-like.
 IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
 IPR011773; DNA-dir_RpoA.
 IPR011260; RNAP_asu_C. 
Pfam
 PF01000; RNA_pol_A_bac
 PF03118; RNA_pol_A_CTD
 PF01193; RNA_pol_L 
SMART
 SM00662; RPOLD 
PROSITE
  
PRINTS