CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005822
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial 
Protein Synonyms/Alias
 P5C dehydrogenase; Aldehyde dehydrogenase family 4 member A1 
Gene Name
 ALDH4A1 
Gene Synonyms/Alias
 ALDH4; P5CDH 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
462VYVYPDDKYKETLQLacetylation[1]
495DVVQEATKVLRNAAGubiquitination[2, 3]
Reference
 [1] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Irreversible conversion of delta-1-pyrroline-5- carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. 
Sequence Annotation
 NP_BIND 286 290 NAD (By similarity).
 ACT_SITE 314 314 Proton acceptor (By similarity).
 ACT_SITE 348 348 Nucleophile.
 BINDING 208 208 NAD (By similarity).
 BINDING 233 233 NAD (By similarity).
 BINDING 447 447 NAD (By similarity).
 BINDING 513 513 Substrate (By similarity).
 MOD_RES 99 99 N6-acetyllysine (By similarity).
 MOD_RES 114 114 N6-acetyllysine (By similarity).
 MOD_RES 402 402 N6-acetyllysine (By similarity).  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Disease mutation; Mitochondrion; NAD; Oxidoreductase; Polymorphism; Proline metabolism; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 563 AA 
Protein Sequence
MLLPAPALRR ALLSRPWTGA GLRWKHTSSL KVANEPVLAF TQGSPERDAL QKALKDLKGR 60
MEAIPCVVGD EEVWTSDVQY QVSPFNHGHK VAKFCYADKS LLNKAIEAAL AARKEWDLKP 120
IADRAQIFLK AADMLSGPRR AEILAKTMVG QGKTVIQAEI DAAAELIDFF RFNAKYAVEL 180
EGQQPISVPP STNSTVYRGL EGFVAAISPF NFTAIGGNLA GAPALMGNVV LWKPSDTAML 240
ASYAVYRILR EAGLPPNIIQ FVPADGPLFG DTVTSSEHLC GINFTGSVPT FKHLWKQVAQ 300
NLDRFHTFPR LAGECGGKNF HFVHRSADVE SVVSGTLRSA FEYGGQKCSA CSRLYVPHSL 360
WPQIKGRLLE EHSRIKVGDP AEDFGTFFSA VIDAKSFARI KKWLEHARSS PSLTILAGGK 420
CDDSVGYFVE PCIVESKDPQ EPIMKEEIFG PVLSVYVYPD DKYKETLQLV DSTTSYGLTG 480
AVFSQDKDVV QEATKVLRNA AGNFYINDKS TGSIVGQQPF GGARASGTND KPGGPHYILR 540
WTSPQVIKET HKPLGDWSYA YMQ 563 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; TAS:Reactome.
 GO:0003842; F:1-pyrroline-5-carboxylate dehydrogenase activity; EXP:Reactome.
 GO:0004029; F:aldehyde dehydrogenase (NAD) activity; TAS:ProtInc.
 GO:0009055; F:electron carrier activity; TAS:UniProtKB.
 GO:0019470; P:4-hydroxyproline catabolic process; TAS:BHF-UCL.
 GO:0034641; P:cellular nitrogen compound metabolic process; TAS:Reactome.
 GO:0006561; P:proline biosynthetic process; IEA:InterPro.
 GO:0006562; P:proline catabolic process; TAS:Reactome.
 GO:0010133; P:proline catabolic process to glutamate; IEA:UniProtKB-UniPathway. 
Interpro
 IPR005931; 1-pyrroline-5-COlate_DH.
 IPR016161; Ald_DH/histidinol_DH.
 IPR016163; Ald_DH_C.
 IPR016160; Ald_DH_CS.
 IPR016162; Ald_DH_N.
 IPR015590; Aldehyde_DH_dom. 
Pfam
 PF00171; Aldedh 
SMART
  
PROSITE
 PS00070; ALDEHYDE_DEHYDR_CYS
 PS00687; ALDEHYDE_DEHYDR_GLU 
PRINTS