CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001549
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Zinc finger Ran-binding domain-containing protein 2 
Protein Synonyms/Alias
 Zinc finger protein 265; Zinc finger, splicing 
Gene Name
 ZRANB2 
Gene Synonyms/Alias
 ZIS; ZNF265 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
54AGGTEIGKTLAEKSRacetylation[1, 2, 3]
59IGKTLAEKSRGLFSAacetylation[3]
168DEDLSKYKLDEDEDEubiquitination[4]
Reference
 [1] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [4] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Splice factor required for alternative splicing of TRA2B/SFRS10 transcripts. May interfere with constitutive 5'- splice site selection. 
Sequence Annotation
 ZN_FING 9 40 RanBP2-type 1.
 ZN_FING 65 94 RanBP2-type 2.
 REGION 151 324 Required for nuclear targeting.
 MOD_RES 9 9 Phosphoserine.
 MOD_RES 54 54 N6-acetyllysine.
 MOD_RES 114 114 Phosphotyrosine (By similarity).
 MOD_RES 120 120 Phosphoserine.
 MOD_RES 153 153 Phosphoserine.
 MOD_RES 181 181 Phosphoserine.
 MOD_RES 188 188 Phosphoserine.
 MOD_RES 193 193 Phosphoserine.
 MOD_RES 290 290 Phosphoserine (By similarity).
 MOD_RES 294 294 Phosphoserine (By similarity).  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Metal-binding; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat; RNA-binding; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 330 AA 
Protein Sequence
MSTKNFRVSD GDWICPDKKC GNVNFARRTS CNRCGREKTT EAKMMKAGGT EIGKTLAEKS 60
RGLFSANDWQ CKTCSNVNWA RRSECNMCNT PKYAKLEERT GYGGGFNERE NVEYIEREES 120
DGEYDEFGRK KKKYRGKAVG PASILKEVED KESEGEEEDE DEDLSKYKLD EDEDEDDADL 180
SKYNLDASEE EDSNKKKSNR RSRSKSRSSH SRSSSRSSSP SSSRSRSRSR SRSSSSSQSR 240
SRSSSRERSR SRGSKSRSSS RSHRGSSSPR KRSYSSSSSS PERNRKRSRS RSSSSGDRKK 300
RRTRSRSPER RHRSSSGSSH SGSRSSSKKK 330 
Gene Ontology
 GO:0005634; C:nucleus; TAS:ProtInc.
 GO:0003723; F:RNA binding; TAS:ProtInc.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; TAS:ProtInc. 
Interpro
 IPR017337; UCP037956_Znf_RanB2.
 IPR001876; Znf_RanBP2. 
Pfam
 PF00641; zf-RanBP 
SMART
 SM00547; ZnF_RBZ 
PROSITE
 PS01358; ZF_RANBP2_1
 PS50199; ZF_RANBP2_2 
PRINTS