CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001865
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Metalloproteinase inhibitor 1 
Protein Synonyms/Alias
 Erythroid-potentiating activity; EPA; Fibroblast collagenase inhibitor; Collagenase inhibitor; Tissue inhibitor of metalloproteinases 1; TIMP-1 
Gene Name
 TIMP1 
Gene Synonyms/Alias
 CLGI; TIMP 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
45SDLVIRAKFVGTPEVubiquitination[1, 2]
70IKMTKMYKGFQALGDubiquitination[1, 2, 3]
141AQRRGFTKTYTVGCEubiquitination[3]
180QLLQGSEKGFQSRHLubiquitination[3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels.
 Lee KA, Hammerle LP, Andrews PS, Stokes MP, Mustelin T, Silva JC, Black RA, Doedens JR.
 J Biol Chem. 2011 Dec 2;286(48):41530-8. [PMID: 21987572
Functional Description
 Complexes with metalloproteinases (such as collagenases) and irreversibly inactivates them by binding to their catalytic zinc cofactor. Also mediates erythropoiesis in vitro; but, unlike IL-3, it is species-specific, stimulating the growth and differentiation of only human and murine erythroid progenitors. Known to act on MMP-1, MMP-2, MMP-3, MMP-7, MMP-8, MMP-9, MMP-10, MMP-11, MMP-12, MMP-13 and MMP-16. Does not act on MMP-14. 
Sequence Annotation
 DOMAIN 24 147 NTR.
 REGION 24 28 Involved in metalloproteinase-binding.
 REGION 90 91 Involved in metalloproteinase-binding.
 METAL 24 24 Zinc; via amino nitrogen and carbonyl
 CARBOHYD 53 53 N-linked (GlcNAc...).
 CARBOHYD 101 101 N-linked (GlcNAc...).
 DISULFID 24 93
 DISULFID 26 122
 DISULFID 36 147
 DISULFID 150 197
 DISULFID 155 160
 DISULFID 168 189  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Disulfide bond; Erythrocyte maturation; Glycoprotein; Metal-binding; Metalloenzyme inhibitor; Metalloprotease inhibitor; Protease inhibitor; Reference proteome; Secreted; Signal; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 207 AA 
Protein Sequence
MAPFEPLASG ILLLLWLIAP SRACTCVPPH PQTAFCNSDL VIRAKFVGTP EVNQTTLYQR 60
YEIKMTKMYK GFQALGDAAD IRFVYTPAME SVCGYFHRSH NRSEEFLIAG KLQDGLLHIT 120
TCSFVAPWNS LSLAQRRGFT KTYTVGCEEC TVFPCLSIPC KLQSGTHCLW TDQLLQGSEK 180
GFQSRHLACL PREPGLCTWQ SLRSQIA 207 
Gene Ontology
 GO:0005604; C:basement membrane; IEA:Compara.
 GO:0005576; C:extracellular region; NAS:UniProtKB.
 GO:0031093; C:platelet alpha granule lumen; TAS:Reactome.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0008191; F:metalloendopeptidase inhibitor activity; IDA:UniProtKB.
 GO:0007568; P:aging; IEA:Compara.
 GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
 GO:0022617; P:extracellular matrix disassembly; TAS:Reactome.
 GO:0043066; P:negative regulation of apoptotic process; IEA:Compara.
 GO:0051045; P:negative regulation of membrane protein ectodomain proteolysis; IDA:UniProtKB.
 GO:1901164; P:negative regulation of trophoblast cell migration; IMP:BHF-UCL.
 GO:0030168; P:platelet activation; TAS:Reactome.
 GO:0002576; P:platelet degranulation; TAS:Reactome.
 GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.
 GO:0034097; P:response to cytokine stimulus; IEA:Compara.
 GO:0043434; P:response to peptide hormone stimulus; IEA:Compara. 
Interpro
 IPR001134; Netrin_domain.
 IPR001820; Prot_inh_TIMP.
 IPR008993; TIMP-like_OB-fold.
 IPR015611; TIMP1.
 IPR027465; TIMP_C_dom. 
Pfam
 PF00965; TIMP 
SMART
 SM00206; NTR 
PROSITE
 PS50189; NTR
 PS00288; TIMP 
PRINTS