CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012225
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Runt-related transcription factor 2 
Protein Synonyms/Alias
 Acute myeloid leukemia 3 protein; Core-binding factor subunit alpha-1; CBF-alpha-1; Oncogene AML-3; Osteoblast-specific transcription factor 2; OSF-2; Polyomavirus enhancer-binding protein 2 alpha A subunit; PEA2-alpha A; PEBP2-alpha A; SL3-3 enhancer factor 1 alpha A subunit; SL3/AKV core-binding factor alpha A subunit 
Gene Name
 RUNX2 
Gene Synonyms/Alias
 AML3; CBFA1; OSF2; PEBP2A 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
233EPRRHRQKLDDSKPSubiquitination[1, 2]
238RQKLDDSKPSLFSDRubiquitination[1, 2]
358LWPSTLSKKSQAGASubiquitination[1, 2]
359WPSTLSKKSQAGASEubiquitination[1, 2]
Reference
 [1] Bone morphogenetic protein-2 stimulates Runx2 acetylation.
 Jeon EJ, Lee KY, Choi NS, Lee MH, Kim HN, Jin YH, Ryoo HM, Choi JY, Yoshida M, Nishino N, Oh BC, Lee KS, Lee YH, Bae SC.
 J Biol Chem. 2006 Jun 16;281(24):16502-11. [PMID: 16613856]
 [2] Post-translational Regulation of Runx2 in Bone and Cartilage.
 Jonason JH, Xiao G, Zhang M, Xing L, Chen D.
 J Dent Res. 2009 Aug;88(8):693-703. [PMID: 19734454
Functional Description
 Transcription factor involved in osteoblastic differentiation and skeletal morphogenesis. Essential for the maturation of osteoblasts and both intramembranous and endochondral ossification. CBF binds to the core site, 5'- PYGPYGGT-3', of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, osteocalcin, osteopontin, bone sialoprotein, alpha 1(I) collagen, LCK, IL-3 and GM-CSF promoters. In osteoblasts, supports transcription activation: synergizes with SPEN/MINT to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE) (By similarity). Inhibits KAT6B-dependent transcriptional activation. 
Sequence Annotation
 DOMAIN 101 229 Runt.
 REGION 242 258 Required for interaction with FOXO1 (By
 REGION 336 439 Interaction with KAT6A (By similarity).
 REGION 374 468 Interaction with KAT6B.
 MOD_RES 451 451 Phosphoserine; by CDK1.  
Keyword
 Alternative splicing; Complete proteome; Disease mutation; DNA-binding; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 521 AA 
Protein Sequence
MASNSLFSTV TPCQQNFFWD PSTSRRFSPP SSSLQPGKMS DVSPVVAAQQ QQQQQQQQQQ 60
QQQQQQQQQQ QEAAAAAAAA AAAAAAAAAV PRLRPPHDNR TMVEIIADHP AELVRTDSPN 120
FLCSVLPSHW RCNKTLPVAF KVVALGEVPD GTVVTVMAGN DENYSAELRN ASAVMKNQVA 180
RFNDLRFVGR SGRGKSFTLT ITVFTNPPQV ATYHRAIKVT VDGPREPRRH RQKLDDSKPS 240
LFSDRLSDLG RIPHPSMRVG VPPQNPRPSL NSAPSPFNPQ GQSQITDPRQ AQSSPPWSYD 300
QSYPSYLSQM TSPSIHSTTP LSSTRGTGLP AITDVPRRIS DDDTATSDFC LWPSTLSKKS 360
QAGASELGPF SDPRQFPSIS SLTESRFSNP RMHYPATFTY TPPVTSGMSL GMSATTHYHT 420
YLPPPYPGSS QSQSGPFQTS STPYLYYGTS SGSYQFPMVP GGDRSPSRML PPCTTTSNGS 480
TLLNPNLPNQ NDGVDADGSH SSSPTVLNSS GRMDESVWRP Y 521 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0000790; C:nuclear chromatin; ISS:BHF-UCL.
 GO:0005667; C:transcription factor complex; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0003682; F:chromatin binding; IEA:Compara.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:ProtInc.
 GO:0044212; F:transcription regulatory region DNA binding; IEA:Compara.
 GO:0030509; P:BMP signaling pathway; ISS:BHF-UCL.
 GO:0048469; P:cell maturation; IEA:Compara.
 GO:0071773; P:cellular response to BMP stimulus; ISS:BHF-UCL.
 GO:0002063; P:chondrocyte development; IEA:Compara.
 GO:0048701; P:embryonic cranial skeleton morphogenesis; IEA:Compara.
 GO:0001958; P:endochondral ossification; IEA:Compara.
 GO:0045879; P:negative regulation of smoothened signaling pathway; IEA:Compara.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.
 GO:0042475; P:odontogenesis of dentin-containing tooth; IEA:Compara.
 GO:0002076; P:osteoblast development; IEA:Compara.
 GO:0001649; P:osteoblast differentiation; IEP:UniProtKB.
 GO:0002051; P:osteoblast fate commitment; IEA:Compara.
 GO:0008284; P:positive regulation of cell proliferation; IEA:Compara.
 GO:0032332; P:positive regulation of chondrocyte differentiation; IEA:Compara.
 GO:0045669; P:positive regulation of osteoblast differentiation; IEA:Compara.
 GO:1901522; P:positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus; ISS:BHF-UCL.
 GO:0040036; P:regulation of fibroblast growth factor receptor signaling pathway; IEA:Compara.
 GO:0042487; P:regulation of odontogenesis of dentin-containing tooth; IEA:Compara.
 GO:0048863; P:stem cell differentiation; IEA:Compara.
 GO:0030217; P:T cell differentiation; IEA:Compara.
 GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome. 
Interpro
 IPR000040; AML1_Runt.
 IPR008967; p53-like_TF_DNA-bd.
 IPR012346; p53/RUNT-type_TF_DNA-bd.
 IPR013524; Runt_dom.
 IPR027384; Runx_central_dom.
 IPR013711; RunxI_C_dom.
 IPR016554; TF_Runt-rel_RUNX. 
Pfam
 PF00853; Runt
 PF08504; RunxI 
SMART
  
PROSITE
 PS51062; RUNT 
PRINTS
 PR00967; ONCOGENEAML1.