CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002376
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Tropomyosin alpha-3 chain 
Protein Synonyms/Alias
 Gamma-tropomyosin; Tropomyosin-3; Tropomyosin-5; hTM5 
Gene Name
 TPM3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
13KKKMQMLKLDKENALacetylation[1]
13KKKMQMLKLDKENALubiquitination[2]
16MQMLKLDKENALDRAubiquitination[3]
60GTEDELDKYSEALKDubiquitination[4]
113RLATALQKLEEAEKAacetylation[1]
119QKLEEAEKAADESERacetylation[5]
137VIENRALKDEEKMELubiquitination[3]
141RALKDEEKMELQEIQacetylation[5]
150ELQEIQLKEAKHIAEubiquitination[2, 4]
153EIQLKEAKHIAEEADubiquitination[3]
162IAEEADRKYEEVARKacetylation[1]
169KYEEVARKLVIIEGDubiquitination[6]
214SLEAQAEKYSQKEDKubiquitination[4]
218QAEKYSQKEDKYEEEubiquitination[2, 3]
221KYSQKEDKYEEEIKIacetylation[1]
252RSVAKLEKTIDDLEDubiquitination[2]
Reference
 [1] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [5] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786]
 [6] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
 Binds to actin filaments in muscle and non-muscle cells. Plays a central role, in association with the troponin complex, in the calcium dependent regulation of vertebrate striated muscle contraction. Smooth muscle contraction is regulated by interaction with caldesmon. In non-muscle cells is implicated in stabilizing cytoskeleton actin filaments. 
Sequence Annotation
 MOD_RES 284 284 Phosphoserine (By similarity).  
Keyword
 Acetylation; Actin-binding; Alternative splicing; Chromosomal rearrangement; Coiled coil; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Disease mutation; Muscle protein; Nemaline myopathy; Phosphoprotein; Proto-oncogene; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 285 AA 
Protein Sequence
MMEAIKKKMQ MLKLDKENAL DRAEQAEAEQ KQAEERSKQL EDELAAMQKK LKGTEDELDK 60
YSEALKDAQE KLELAEKKAA DAEAEVASLN RRIQLVEEEL DRAQERLATA LQKLEEAEKA 120
ADESERGMKV IENRALKDEE KMELQEIQLK EAKHIAEEAD RKYEEVARKL VIIEGDLERT 180
EERAELAESK CSELEEELKN VTNNLKSLEA QAEKYSQKED KYEEEIKILT DKLKEAETRA 240
EFAERSVAKL EKTIDDLEDE LYAQKLKYKA ISEELDHALN DMTSI 285 
Gene Ontology
 GO:0032154; C:cleavage furrow; IEA:Compara.
 GO:0030863; C:cortical cytoskeleton; IEA:Compara.
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0031941; C:filamentous actin; IEA:Compara.
 GO:0030426; C:growth cone; IEA:Compara.
 GO:0005862; C:muscle thin filament tropomyosin; TAS:UniProtKB.
 GO:0002102; C:podosome; IEA:Compara.
 GO:0001725; C:stress fiber; IDA:MGI.
 GO:0030049; P:muscle filament sliding; TAS:Reactome.
 GO:0006937; P:regulation of muscle contraction; NAS:UniProtKB. 
Interpro
 IPR000533; Tropomyosin. 
Pfam
 PF00261; Tropomyosin 
SMART
  
PROSITE
 PS00326; TROPOMYOSIN 
PRINTS
 PR00194; TROPOMYOSIN.