CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042491
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Vacuolar protein sorting-associated protein 13A 
Protein Synonyms/Alias
  
Gene Name
 VPS13A 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
78DPEEENYKVPEYKTVubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 383 AA 
Protein Sequence
XSRFSGEGKN WSSLINLHCQ LELEVHYYNE MFGVWEPLLE PLEIDQTEDF RPWNLGIKMK 60
KKAKMAIVES DPEEENYKVP EYKTVISFHS KDQLNITLSK CGLVMLNNLV KAFTEAATGS 120
SADFVKDLAP FMILNSLGLT ISVSPSDSFS VLNIPMAKSY VLKNGESLSM DYIRTKDNDH 180
FNAMTSLSSK LFFILLTPVN HSTADKIPLT KVGRRLYTVR HRESGVERSI VCQIDTVEGS 240
KKVTIRSPVQ IRNHFSVPLS VYEGDTLLGT ASPENEFNIP LGSYRSFIFL KPEDENYQMC 300
EGIDFEEIIK NDGALLKKKC RSKNPSKESF LINIVPEKDN LTSLSVYSED GWDLPYIMHL 360
WPPILLRNLL PYKIAYYIEV SAN 383 
Gene Ontology
  
Interpro
 IPR026847; VPS13. 
Pfam
  
SMART
  
PROSITE
  
PRINTS