CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016126
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonuclease H2 subunit B 
Protein Synonyms/Alias
 RNase H2 subunit B; Deleted in lymphocytic leukemia 8 homolog; Ribonuclease HI subunit B 
Gene Name
 Rnaseh2b 
Gene Synonyms/Alias
 Dleu8 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
292KVDKSGMKSIDAFFGacetylation[1]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441
Functional Description
 Non catalytic subunit of RNase H2, an endonuclease that specifically degrades the RNA of RNA:DNA hybrids. Participates in DNA replication, possibly by mediating the removal of lagging- strand Okazaki fragment RNA primers during DNA replication. Mediates the excision of single ribonucleotides from DNA:RNA duplexes. 
Sequence Annotation
 MOD_RES 292 292 N6-acetyllysine (By similarity).  
Keyword
 3D-structure; Acetylation; Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 308 AA 
Protein Sequence
MAGGRDRGDL AARQLVFLLP EHLKDASKKK KKSSLLFVKL ANPHSGEGAT YLIDMCLQQL 60
FEIKVFKEKH HSWFINQSVQ SGGLLHFATP MDPLFLLLHY LLKAGKEGKY QPLDQVVVDD 120
TFPDCTLLLR FPELEKSLRH VTEEKEVNSK KYYKYSSEKT LKWLEKKVNQ TVVALKANNV 180
NVGARVQSSA YFSGGQVSRD KEEDYVRYAH GLISDYIPKE LSDDLSKFLK LPEPPASLTN 240
PPSKKLKLSD EPVEAKEDYT KFNTKDLKTG KKNSKMTAAQ KALAKVDKSG MKSIDAFFGA 300
KNKKTGKI 308 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0032299; C:ribonuclease H2 complex; ISS:UniProtKB.
 GO:0004523; F:ribonuclease H activity; IDA:MGI.
 GO:0001701; P:in utero embryonic development; IMP:MGI.
 GO:0010629; P:negative regulation of gene expression; IMP:MGI.
 GO:0048146; P:positive regulation of fibroblast proliferation; IMP:MGI.
 GO:2000001; P:regulation of DNA damage checkpoint; IMP:MGI.
 GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:MGI.
 GO:0009259; P:ribonucleotide metabolic process; IMP:MGI.
 GO:0006401; P:RNA catabolic process; ISS:UniProtKB. 
Interpro
 IPR019024; RNase_H2_suB. 
Pfam
 PF09468; RNase_H2-Ydr279 
SMART
  
PROSITE
  
PRINTS