CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031361
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Zinc finger protein 398 
Protein Synonyms/Alias
 cDNA FLJ59779, highly similar to Zinc finger protein 398 
Gene Name
 ZNF398 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
88KKLASCEKTVTELGNubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 647 AA 
Protein Sequence
MIGLIQGRRL AEQTSEWDSE CLTSLQPLPL PTPPAANEAH LQTAAISLWT VVAAVQAIER 60
KVEIHSRRLL HLEGRTGTAE KKLASCEKTV TELGNQLEGK WAVLGTLLQE YGLLQRRLEN 120
LENLLRNRNF WILRLPPGIK GDIPKVPVAF DDVSIYFSTP EWEKLEEWQK ELYKNIMKGN 180
YESLISMDYA INQPDVLSQI QPEGEHNTED QAGPEESEIP TDPSEEPGIS TSDILSWIKQ 240
EEEPQVGAPP ESKESDVYKS TYADEELVIK AEGLARSSLC PEVPVPFSSP PAAAKDAFSD 300
VAFKSQQSTS MTPFGRPATD LPEASEGQVT FTQLGSYPLP PPVGEQVFSC HHCGKNLSQD 360
MLLTHQCSHA TEHPLPCAQC PKHFTPQADL SSTSQDHASE TPPTCPHCAR TFTHPSRLTY 420
HLRVHNSTER PFPCPDCPKR FADQARLTSH RRAHASERPF RCAQCGRSFS LKISLLLHQR 480
GHAQERPFSC PQCGIDFNGH SALIRHQMIH TGERPYPCTD CSKSFMRKEH LLNHRRLHTG 540
ERPFSCPHCG KSFIRKHHLM KHQRIHTGER PYPCSYCGRS FRYKQTLKDH LRSGHNGGCG 600
GDSDPSGQPP NPPGPLITGL ETSGLGVNTE GLETNQWYGE GSGGGVL 647 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR022137; DUF3669_Znf.
 IPR001909; Krueppel-associated_box.
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like.
 IPR013087; Znf_C2H2/integrase_DNA-bd. 
Pfam
 PF12417; DUF3669
 PF01352; KRAB 
SMART
 SM00349; KRAB
 SM00355; ZnF_C2H2 
PROSITE
 PS50805; KRAB
 PS00028; ZINC_FINGER_C2H2_1
 PS50157; ZINC_FINGER_C2H2_2 
PRINTS