CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008778
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nucleolar protein 13 
Protein Synonyms/Alias
  
Gene Name
 NOP13 
Gene Synonyms/Alias
 YNL175C; N1665 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
8MSETELSKEDAVTKKacetylation[1]
69TLEELNAKYNIDPKSacetylation[1]
94KKSGASEKDAQGEESacetylation[1]
226NYSGRPDKDDLVAMSacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919] 
Functional Description
  
Sequence Annotation
 DOMAIN 125 219 RRM 1.
 DOMAIN 239 317 RRM 2.
 MOD_RES 2 2 N-acetylserine.
 MOD_RES 2 2 Phosphoserine.
 MOD_RES 105 105 Phosphothreonine.
 MOD_RES 335 335 Phosphoserine.  
Keyword
 Acetylation; Complete proteome; Nucleus; Phosphoprotein; Reference proteome; Repeat; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 403 AA 
Protein Sequence
MSETELSKED AVTKKDNEEQ VKKALLDPTK KRKAEDEIEI DLKSSIPLSK KQKRLLRRGK 60
VTLEELNAKY NIDPKSIEEY KEDAEKKKSG ASEKDAQGEE STINTPTGDE SGEVVKKKKK 120
DENKYGVWIG NLSFDTTKDD LVRFFIAKTK DNEDEKSRVT EQDITRLSMP RVAAKNSNAM 180
KNKGFCYMFF KNVEQMKAVL ELSESHLNGR NMLIKDSENY SGRPDKDDLV AMSKNPPSRI 240
LFVGNLSFDV TDDLLRKHFQ HCGDIVKIRM ATFEDSGKCK GFAFIDFKNE EGSTNALKDK 300
SCRKIAGRPL RMEYGEDRSK RQVRKKVENV SRNNSSSFDI SNNKGYDRAG QDNGSKPEYK 360
RSNANRRPPV DSNNRTKSSV ALATAQRGSA AIVPSQGKKV KFD 403 
Gene Ontology
 GO:0005730; C:nucleolus; IDA:SGD.
 GO:0030684; C:preribosome; IDA:SGD.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; ISS:SGD. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS