CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035016
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Ybx2 
Protein Synonyms/Alias
  
Gene Name
 Ybx2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
88PARSQADKPVLAIQVacetylation[1]
117FINRNDTKEDVFVHQacetylation[1]
128FVHQTAIKRNNPRKFacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 171 AA 
Protein Sequence
MSEAEAAVVA TAAPAATVPA TAAGVVAVVV PVPAGEPQKA GGGAGGGGGA ASGPAAGTPS 60
APGPRTPGNQ ATAASGTPAP PARSQADKPV LAIQVLGTVK WFNVRNGYGF INRNDTKEDV 120
FVHQTAIKRN NPRKFLRSVG DGETVEFDVV EGVIPTQRTP RATIWYLPVS N 171 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:RGD.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0048599; P:oocyte development; IEP:RGD.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR019844; Cold-shock_CS.
 IPR011129; Cold_shock_prot.
 IPR002059; CSP_DNA-bd.
 IPR012340; NA-bd_OB-fold. 
Pfam
 PF00313; CSD 
SMART
 SM00357; CSP 
PROSITE
 PS00352; COLD_SHOCK 
PRINTS
 PR00050; COLDSHOCK.