CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012984
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pleckstrin homology domain-containing family F member 1 
Protein Synonyms/Alias
 PH domain-containing family F member 1; Lysosome-associated apoptosis-inducing protein containing PH and FYVE domains 
Gene Name
 Plekhf1 
Gene Synonyms/Alias
 Lapf 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
44LGEGVLTKECRKKAKubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 May induce apoptosis through the lysosomal-mitochondrial pathway. Translocates to the lysosome initiating the permeabilization of lysosomal membrane (LMP) and resulting in the release of CTSD and CTSL to the cytoplasm. Triggers the caspase- independent apoptosis by altering mitochondrial membrane permeabilization (MMP) resulting in the release of PDCD8 (By similarity). 
Sequence Annotation
 DOMAIN 35 131 PH.
 ZN_FING 152 212 FYVE-type.  
Keyword
 Apoptosis; Complete proteome; Cytoplasm; Lysosome; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 279 AA 
Protein Sequence
MVDHLANTEI NSQRIAAVES CFGASGQPLA LPGRVLLGEG VLTKECRKKA KPRIFFLFND 60
ILVYGSIVLS KRKYRSQHII PLEEVTLEPL PETLQAKNRW MIKTAKKSFV VSAASTTERQ 120
EWISHIEECV RRQLLATGRQ PTTEHAAPWI PDKATDICMR CTQTRFSALT RRHHCRKCGF 180
VVCAECSRER FLLPRLSPKP LRVCSLCYRE LAAQKLREEA REGIGGSPPQ LSHLGGTVCG 240
ASSGDDDDSD EDREGNGDGD WPTQVEFYAS GVSWSAFHS 279 
Gene Ontology
 GO:0005768; C:endosome; IEA:Compara.
 GO:0005764; C:lysosome; IDA:MGI.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0032266; F:phosphatidylinositol-3-phosphate binding; IEA:Compara.
 GO:0070273; F:phosphatidylinositol-4-phosphate binding; IEA:Compara.
 GO:0010314; F:phosphatidylinositol-5-phosphate binding; IEA:Compara.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0007032; P:endosome organization; IEA:Compara.
 GO:0006917; P:induction of apoptosis; IDA:MGI.
 GO:0010508; P:positive regulation of autophagy; IEA:Compara.
 GO:0072659; P:protein localization to plasma membrane; IEA:Compara.
 GO:0046902; P:regulation of mitochondrial membrane permeability; ISA:MGI.
 GO:0016050; P:vesicle organization; IEA:Compara. 
Interpro
 IPR011993; PH_like_dom.
 IPR001849; Pleckstrin_homology.
 IPR000306; Znf_FYVE.
 IPR017455; Znf_FYVE-rel.
 IPR011011; Znf_FYVE_PHD.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF01363; FYVE
 PF00169; PH 
SMART
 SM00064; FYVE
 SM00233; PH 
PROSITE
 PS50003; PH_DOMAIN
 PS50178; ZF_FYVE 
PRINTS