CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019794
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Aconitate hydratase, mitochondrial 
Protein Synonyms/Alias
 Aconitase; Citrate hydro-lyase 
Gene Name
 ACO2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
13LLVTRLQKALGVRQYubiquitination[1]
50IHYDLLEKNINIVRKacetylation[2]
68RPLTLSEKIVYGHLDubiquitination[1]
144EKDLRRAKDINQEVYubiquitination[1]
245LSGWSSPKDVILKVAubiquitination[1]
370EVGKVAEKEGWPLDIubiquitination[1, 3]
401GRSAAVAKQALAHGLubiquitination[1]
520YLTGTDGKKFRLEAPubiquitination[1]
549DTYQHPPKDSSGQHVacetylation[4]
573QLLEPFDKWDGKDLEacetylation[2]
605SAAGPWLKFRGHLDNacetylation[2]
701IHETNLKKQGLLPLTubiquitination[1]
723NKIHPVDKLTIQGLKubiquitination[1]
730KLTIQGLKDFTPGKPubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [2] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786
Functional Description
 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (By similarity). 
Sequence Annotation
 REGION 192 194 Substrate binding (By similarity).
 REGION 670 671 Substrate binding (By similarity).
 METAL 385 385 Iron-sulfur (4Fe-4S) (By similarity).
 METAL 448 448 Iron-sulfur (4Fe-4S) (By similarity).
 METAL 451 451 Iron-sulfur (4Fe-4S) (By similarity).
 BINDING 99 99 Substrate (By similarity).
 BINDING 474 474 Substrate (By similarity).
 BINDING 479 479 Substrate (By similarity).
 BINDING 607 607 Substrate (By similarity).
 MOD_RES 28 28 Pyrrolidone carboxylic acid (By
 MOD_RES 50 50 N6-acetyllysine (By similarity).
 MOD_RES 559 559 Phosphoserine.
 MOD_RES 573 573 N6-acetyllysine.
 MOD_RES 605 605 N6-acetyllysine.
 CROSSLNK 144 144 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 4Fe-4S; Acetylation; Complete proteome; Direct protein sequencing; Disease mutation; Iron; Iron-sulfur; Isopeptide bond; Lyase; Metal-binding; Mitochondrion; Neurodegeneration; Phosphoprotein; Polymorphism; Pyrrolidone carboxylic acid; Reference proteome; Transit peptide; Tricarboxylic acid cycle; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 780 AA 
Protein Sequence
MAPYSLLVTR LQKALGVRQY HVASVLCQRA KVAMSHFEPN EYIHYDLLEK NINIVRKRLN 60
RPLTLSEKIV YGHLDDPASQ EIERGKSYLR LRPDRVAMQD ATAQMAMLQF ISSGLSKVAV 120
PSTIHCDHLI EAQVGGEKDL RRAKDINQEV YNFLATAGAK YGVGFWKPGS GIIHQIILEN 180
YAYPGVLLIG TDSHTPNGGG LGGICIGVGG ADAVDVMAGI PWELKCPKVI GVKLTGSLSG 240
WSSPKDVILK VAGILTVKGG TGAIVEYHGP GVDSISCTGM ATICNMGAEI GATTSVFPYN 300
HRMKKYLSKT GREDIANLAD EFKDHLVPDP GCHYDQLIEI NLSELKPHIN GPFTPDLAHP 360
VAEVGKVAEK EGWPLDIRVG LIGSCTNSSY EDMGRSAAVA KQALAHGLKC KSQFTITPGS 420
EQIRATIERD GYAQILRDLG GIVLANACGP CIGQWDRKDI KKGEKNTIVT SYNRNFTGRN 480
DANPETHAFV TSPEIVTALA IAGTLKFNPE TDYLTGTDGK KFRLEAPDAD ELPKGEFDPG 540
QDTYQHPPKD SSGQHVDVSP TSQRLQLLEP FDKWDGKDLE DLQILIKVKG KCTTDHISAA 600
GPWLKFRGHL DNISNNLLIG AINIENGKAN SVRNAVTQEF GPVPDTARYY KKHGIRWVVI 660
GDENYGEGSS REHAALEPRH LGGRAIITKS FARIHETNLK KQGLLPLTFA DPADYNKIHP 720
VDKLTIQGLK DFTPGKPLKC IIKHPNGTQE TILLNHTFNE TQIEWFRAGS ALNRMKELQQ 780 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; TAS:Reactome.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:Compara.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0052632; F:citrate hydro-lyase (cis-aconitate-forming) activity; IEA:EC.
 GO:0005506; F:iron ion binding; IDA:MGI.
 GO:0052633; F:isocitrate hydro-lyase (cis-aconitate-forming) activity; IEA:EC.
 GO:0008219; P:cell death; IEA:UniProtKB-KW.
 GO:0006101; P:citrate metabolic process; IDA:MGI.
 GO:0006102; P:isocitrate metabolic process; IEA:Compara.
 GO:0006099; P:tricarboxylic acid cycle; IDA:MGI. 
Interpro
 IPR015931; Acnase/IPM_dHydase_lsu_aba_1/3.
 IPR015937; Acoase/IPM_deHydtase.
 IPR001030; Acoase/IPM_deHydtase_lsu_aba.
 IPR015928; Aconitase/3IPM_dehydase_swvl.
 IPR015932; Aconitase/IPMdHydase_lsu_aba_2.
 IPR018136; Aconitase_4Fe-4S_BS.
 IPR006248; Aconitase_mito-like.
 IPR000573; AconitaseA/IPMdHydase_ssu_swvl. 
Pfam
 PF00330; Aconitase
 PF00694; Aconitase_C 
SMART
  
PROSITE
 PS00450; ACONITASE_1
 PS01244; ACONITASE_2 
PRINTS
 PR00415; ACONITASE.