CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006377
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized protein YKL187C 
Protein Synonyms/Alias
  
Gene Name
 YKL187C 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
665SGSVTNRKGEIYTYGubiquitination[1]
697DDDADFEKQVNRNEIubiquitination[1, 2, 3, 4]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, Villén J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] A proteomics approach to understanding protein ubiquitination.
 Peng J, Schwartz D, Elias JE, Thoreen CC, Cheng D, Marsischky G, Roelofs J, Finley D, Gygi SP.
 Nat Biotechnol. 2003 Aug;21(8):921-6. [PMID: 12872131]
 [3] Computational identification of ubiquitylation sites from protein sequences.
 Tung CW, Ho SY.
 BMC Bioinformatics. 2008 Jul 15;9:310. [PMID: 18625080]
 [4] Identification, analysis, and prediction of protein ubiquitination sites.
 Radivojac P, Vacic V, Haynes C, Cocklin RR, Mohan A, Heyen JW, Goebl MG, Iakoucheva LM.
 Proteins. 2010 Feb 1;78(2):365-80. [PMID: 19722269] 
Functional Description
  
Sequence Annotation
 MOD_RES 675 675 Phosphoserine.
 MOD_RES 678 678 Phosphoserine.
 CARBOHYD 61 61 N-linked (GlcNAc...) (Potential).
 CARBOHYD 84 84 N-linked (GlcNAc...) (Potential).
 CARBOHYD 115 115 N-linked (GlcNAc...) (Potential).
 CARBOHYD 154 154 N-linked (GlcNAc...) (Potential).
 CARBOHYD 176 176 N-linked (GlcNAc...) (Potential).
 CARBOHYD 197 197 N-linked (GlcNAc...) (Potential).
 CARBOHYD 207 207 N-linked (GlcNAc...) (Potential).
 CARBOHYD 228 228 N-linked (GlcNAc...) (Potential).
 CARBOHYD 241 241 N-linked (GlcNAc...) (Potential).
 CARBOHYD 267 267 N-linked (GlcNAc...) (Potential).
 CARBOHYD 293 293 N-linked (GlcNAc...) (Potential).
 CARBOHYD 299 299 N-linked (GlcNAc...) (Potential).
 CARBOHYD 312 312 N-linked (GlcNAc...) (Potential).
 CARBOHYD 335 335 N-linked (GlcNAc...) (Potential).
 CARBOHYD 351 351 N-linked (GlcNAc...) (Potential).
 CARBOHYD 373 373 N-linked (GlcNAc...) (Potential).
 CARBOHYD 389 389 N-linked (GlcNAc...) (Potential).
 CARBOHYD 519 519 N-linked (GlcNAc...) (Potential).
 CARBOHYD 709 709 N-linked (GlcNAc...) (Potential).
 CARBOHYD 714 714 N-linked (GlcNAc...) (Potential).
 CARBOHYD 724 724 N-linked (GlcNAc...) (Potential).
 CROSSLNK 697 697 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Complete proteome; Glycoprotein; Isopeptide bond; Mitochondrion; Phosphoprotein; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 750 AA 
Protein Sequence
MRIEKHRTPL SKGIIWTILS VCLLFMFTTL ILVIVATAGS TANYKPLTNI YIGEADIKHI 60
NVSKVIPQIG PILTILGSAL TAPNSSLDDI FGAMKNIADT PALTPLLTLL SNADNTTVTI 120
ESLTELAPLA ISGNPASSTR QLTEINGLLK YSDNATETLD GLSRLVSASL SSASSNSSSD 180
STTLVLDLLK DSDNPQNSTD ALLTLNNLTM SEKAQLLPVF RLFAFSTNQT ATMTALATLM 240
NTTISSSLAQ TLLTQLQNTI SNGGSLNNTF STLQPLVPQA SAPAFDAVEL LLNQTTSTNQ 300
TLSTLSDLLE QNLTQSSSAK KAFAALTQLM ENSDNSTMVV TSVQSLAAVT NTTQSTQQLI 360
GLDDVISSSS NTNETLSILS ELQSGLSGNS SSVQYIPYLF SLLGASTDPK TTFSSLVTLT 420
SWAQENPQTF LPILDILADA KSVQPISAEE LNAMTPNILE YLKIPIYYRL SIFTLCHANL 480
ENKILDCNSP HAVQNLDFRS IIYDALVTSD FQPYLNALNI SANDLYLEGK LLHREHQYVP 540
AVRSVLALNL LAIIFSFFTM IFIILLYFNR YMFKQPLWLI ALALHVCVGV ATVLAAIIIS 600
VMIAIIKSGT ADDKYGVVFK AGPAYTGLIW TAFALSFIAT GLIIYTWWRN RRSGRYMSGS 660
VTNRKGEIYT YGDGSAISAD RFGDHNLGDD DDADFEKQVN RNEITAIDNS SSANNTDVTG 720
STSNRTELSH PDVTPKDSNG PVNNNAHLVA 750 
Gene Ontology
 GO:0016021; C:integral to membrane; ISM:SGD.
 GO:0005739; C:mitochondrion; IDA:SGD.
 GO:0015909; P:long-chain fatty acid transport; IMP:SGD. 
Interpro
 IPR011989; ARM-like.
 IPR009571; SUR7/PalI. 
Pfam
 PF06687; SUR7 
SMART
  
PROSITE
  
PRINTS