CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024276
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S6 
Protein Synonyms/Alias
  
Gene Name
 rpsF 
Gene Synonyms/Alias
 MSMEG_6897; MSMEI_6713 
Created Date
 July 27, 2013 
Organism
 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) 
NCBI Taxa ID
 246196 
Lysine Modification
Position
Peptide
Type
References
33KDGGTVDKVDIWGRRpupylation[1]
Reference
 [1] Expansion of the mycobacterial "PUPylome".
 Watrous J, Burns K, Liu WT, Patel A, Hook V, Bafna V, Barry CE 3rd, Bark S, Dorrestein PC.
 Mol Biosyst. 2010 Feb;6(2):376-85. [PMID: 20094657
Functional Description
 Binds together with S18 to 16S ribosomal RNA (By similarity). 
Sequence Annotation
 CROSSLNK 33 33 Isoglutamyl lysine isopeptide (Lys-Gln)  
Keyword
 Complete proteome; Isopeptide bond; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 90 AA 
Protein Sequence
MVILDPTLDE RTVAPSLETF LNVIRKDGGT VDKVDIWGRR RLAYEIAKHA EGIYAVIDVK 60
AEPATVSELD RQLNLNESVL RTKVLRTDKH 90 
Gene Ontology
 GO:0005840; C:ribosome; IEA:UniProtKB-KW.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR000529; Ribosomal_S6.
 IPR020815; Ribosomal_S6_CS.
 IPR020814; Ribosomal_S6_plastid/chlpt.
 IPR014717; Transl_elong_EF1B/ribosomal_S6. 
Pfam
 PF01250; Ribosomal_S6 
SMART
  
PROSITE
 PS01048; RIBOSOMAL_S6 
PRINTS