CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010832
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CD83 antigen 
Protein Synonyms/Alias
 hCD83; B-cell activation protein; Cell surface protein HB15; CD83 
Gene Name
 CD83 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
177SIFPDFSKAGMERAFubiquitination[1]
192LPVTSPNKHLGLVTPubiquitination[2, 3]
201LGLVTPHKTELV***ubiquitination[2, 3]
Reference
 [1] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 May play a significant role in antigen presentation or the cellular interactions that follow lymphocyte activation. 
Sequence Annotation
 DOMAIN 20 114 Ig-like V-type.
 CARBOHYD 79 79 N-linked (GlcNAc...).
 CARBOHYD 86 86 N-linked (GlcNAc...); atypical.
 CARBOHYD 96 96 N-linked (GlcNAc...) (Potential).
 CARBOHYD 117 117 N-linked (GlcNAc...) (Potential).
 DISULFID 35 107 Potential.  
Keyword
 Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Immunoglobulin domain; Membrane; Polymorphism; Reference proteome; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 205 AA 
Protein Sequence
MSRGLQLLLL SCAYSLAPAT PEVKVACSED VDLPCTAPWD PQVPYTVSWV KLLEGGEERM 60
ETPQEDHLRG QHYHQKGQNG SFDAPNERPY SLKIRNTTSC NSGTYRCTLQ DPDGQRNLSG 120
KVILRVTGCP AQRKEETFKK YRAEIVLLLA LVIFYLTLII FTCKFARLQS IFPDFSKAGM 180
ERAFLPVTSP NKHLGLVTPH KTELV 205 
Gene Ontology
 GO:0009897; C:external side of plasma membrane; IEA:Compara.
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0006952; P:defense response; TAS:ProtInc.
 GO:0006959; P:humoral immune response; TAS:ProtInc.
 GO:0032713; P:negative regulation of interleukin-4 production; IEA:Compara.
 GO:0043372; P:positive regulation of CD4-positive, alpha-beta T cell differentiation; IEA:Compara.
 GO:0032733; P:positive regulation of interleukin-10 production; IEA:Compara.
 GO:0032743; P:positive regulation of interleukin-2 production; IEA:Compara.
 GO:0014070; P:response to organic cyclic compound; IEA:Compara.
 GO:0007165; P:signal transduction; TAS:ProtInc. 
Interpro
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR003599; Ig_sub.
 IPR013106; Ig_V-set. 
Pfam
 PF07686; V-set 
SMART
 SM00409; IG 
PROSITE
 PS50835; IG_LIKE 
PRINTS