CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013392
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Next to BRCA1 gene 1 protein 
Protein Synonyms/Alias
 Neighbor of BRCA1 gene 1 protein 
Gene Name
 Nbr1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
127RVLGSDMKTTEEPTAubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
 Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets (By similarity). 
Sequence Annotation
 DOMAIN 4 86 OPR.
 DOMAIN 930 974 UBA.
 ZN_FING 213 259 ZZ-type.
 REGION 544 638 ATG8 family proteins-binding (By
 REGION 745 756 ATG8 family proteins-binding (By  
Keyword
 Complete proteome; Cytoplasm; Cytoplasmic vesicle; Lysosome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 983 AA 
Protein Sequence
MEPQVTLNVT FKNETQSFLV SDPENTTWAD VEAMVKVSFD LNTIQIKYLD EENEEISINS 60
QGEYEEALKM ANIKQGNQLQ MQVHEGCHVV DEVLPQTVVE KQATARTGKK PLAHYSSLVR 120
VLGSDMKTTE EPTAEARSPV PCDTDKPQDK PPDWFTSYLE MFREQVVKET VEKLEQRLQE 180
KLVLQKPPFS SSPSEVSMPI SEEETLFLPE NQFSWHIACS HCQKRIVGVR YQCSLCPSYN 240
ICEDCEAGPY SHDTNHILLK FRRPVVISSE PFFYSKYPTP RLPAALEQVR LQKQVDKNFV 300
KAEKQRLRAE KKQRKAEVKE LKKQLKLHRK IHLWNSIHGL QSPKSPLGRP ESLLQSNTLM 360
LPLQPCAPVM PTLSAAFVDE NLPDGTHLQP GTKFIKHWRM KNTGNVKWSA DTKLKFMWGN 420
LTLASTEKKD VLVPCLKAGH IGVVSVEFIA PTLEGTYTLH WRLSHKGQQF GPRVWCSIIV 480
DPFPSSESPV NLERDGISSS KADDFTCEQE EAFLLAEEEI PLGEVTKQTE GTGSSAPQKT 540
QHAASERELY IPSVDLLTAQ DLLSFELLDI NIVQELERVP HNTPVDVTPR MSPLPHDSPL 600
IEKPGLGRIQ EESEGAGLKA SPDSTVLTKR KAETPASVEE TEEDLSGTQF VCETVIRSLT 660
LDAAPDHNPP CRQRSPQREL QLYSTEEQQP LMLPGFCRKD SSLKFALPEE GPHGDEREEI 720
VHIAEEEAIE EEDVQDEEVQ SQSSASSEDY IIILPECFDT SRPLGDSMYS SALSQPGLER 780
GAEGEPGIES GQEPAEARER LPERESQPKE QSISDILTTS QHLDTVPLVP EVAGLPAALS 840
RSAPCGQYEA PRVDSPVTIQ EVLPVPDHVR GEPRGSTGLA NSRQKSCDHS RHHNGSSIAG 900
GLVKGALSVA ASAYKALFSG PPVTAQPVIS EDQTAALMAH LFEMGFCDRQ LNLRLLRKHN 960
HNILQVVTEL LQVNNNDWYS HRY 983 
Gene Ontology
 GO:0005776; C:autophagic vacuole; IEA:UniProtKB-SubCell.
 GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
 GO:0005829; C:cytosol; ISS:UniProtKB.
 GO:0005770; C:late endosome; ISS:UniProtKB.
 GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.
 GO:0031430; C:M band; IEA:UniProtKB-SubCell.
 GO:0043130; F:ubiquitin binding; ISS:UniProtKB.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0016236; P:macroautophagy; ISS:UniProtKB.
 GO:0051259; P:protein oligomerization; ISS:UniProtKB. 
Interpro
 IPR000270; OPR_PB1.
 IPR009060; UBA-like.
 IPR015940; UBA/transl_elong_EF1B_N_euk.
 IPR000433; Znf_ZZ. 
Pfam
 PF00564; PB1
 PF00569; ZZ 
SMART
 SM00666; PB1
 SM00291; ZnF_ZZ 
PROSITE
 PS50030; UBA
 PS01357; ZF_ZZ_1
 PS50135; ZF_ZZ_2 
PRINTS