CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035635
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Mysm1 
Protein Synonyms/Alias
  
Gene Name
 Mysm1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
658RDIDTQAKYQSYFSRubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 811 AA 
Protein Sequence
MEAEEADVDV EGDVAAAAQP GNDGNTASVF QDHYLDSTWR RENGCLPWTL DSTISDENRA 60
VIEKMLLEEE YYLSNKSLPG KFWVNQKEND KKCTNSLQKT GKIMVRSPAK PSSYSVKWTI 120
EEKKLFEQGL AKFGRRWTKI AALVKSRTVL QVKSYARQYF RNKVKWGAEK ETPTLKSNSD 180
LQVKNKDERT KVWVASDPNL NAVKIEKLSD DEDVDITDEL DELTSQTSQK NYGGHLTLDV 240
PSSKMYKTNQ GELCQEGSLA KSAEENLQNV KQSEAEACSS SEIMSWAEKQ NNNGKNSVEL 300
NEKYSKLVEE YTMLTEETKH SPSPEPCEGQ KDPRGNELLL PPCQVEEENH EGEELKPPEQ 360
EVEIDRNVIQ EEEKQAIPEF FEGRQTKTPE RYLKIRNYIL DQWEICKPKY LNKTSVRPGL 420
KNCGDVNCIG RIHTYLELIG AINFGCEQAI YNRPQPVDKV RVTDRKDAEA AYQLAWRLQS 480
MRTRRRRVRD PWGNWCDAKD LEGQTFEHLS VEELARREEE EKCKPIKFSK ASKLPKSSLD 540
PFQLIPCHFF SGEKQEPFQV KVASEALLIM DLHAHVSMAE VIGLLGGRYS EADKVLEVCA 600
AEPCNSLSTG LQCEMDPVSQ TQASETLALR GCSVIGWYHS HPAFDPNPSL RDIDTQAKYQ 660
SYFSRGGAKF IGMIVSPYNR SNPLPYSQIT CLVISEELSP DGTYRLPYKF EVQQMLEEPQ 720
WELVFEKTRW IIEKYRLSHS SVPMDRIFRR DSDLTCLQKL LECLRKTLSK VANCFIAEEF 780
LTQVENLFLS NYKSKEENGL AEENSAKELF M 811 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0003682; F:chromatin binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0008237; F:metallopeptidase activity; IEA:Compara.
 GO:0003713; F:transcription coactivator activity; IEA:Compara.
 GO:0004221; F:ubiquitin thiolesterase activity; IEA:Compara.
 GO:0004843; F:ubiquitin-specific protease activity; IEA:Compara.
 GO:0016578; P:histone deubiquitination; IEA:Compara.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:Compara. 
Interpro
 IPR009057; Homeodomain-like.
 IPR000555; JAB1_Mov34_MPN_PAD1.
 IPR001005; SANT/Myb.
 IPR017884; SANT_dom.
 IPR007526; SWIRM.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF01398; JAB
 PF00249; Myb_DNA-binding
 PF04433; SWIRM 
SMART
 SM00232; JAB_MPN
 SM00717; SANT 
PROSITE
 PS51293; SANT
 PS50934; SWIRM 
PRINTS