CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035576
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Prpf39 
Protein Synonyms/Alias
  
Gene Name
 Prpf39 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
343KRPYFHVKPLEKAQLacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 664 AA 
Protein Sequence
MQNSHMDEYR NSDNGSTGNS SEVVIEHPDF STEIMNVTEM EQSPDASPSV RVSTEENEMA 60
NAVDLPVTET EGNFPPEFEK FWKTVETNPQ DFTGWVYLLQ YVEQENHLMA ARKAFDKFFI 120
HYPYCYGYWK KYADLEKRHD NIKQSDEVYR RGLQAIPLSV DLWIHYINFL KETLDPGDPE 180
TNSTIRGTFE HAVLAAGTDF RSDKLWEMYI NWENEQGNLR EVTAVYDRIL GIPTQLYSHH 240
FQRFKEHVQN NLPRDLLTGE QFIQLRRELA SVNGHNGDDG PPGDDLPSGI EDITDPAKLI 300
TEIENMRHRI IEIHQEMFNY NEHEVSKRWT FEEGIKRPYF HVKPLEKAQL KNWKEYLEFE 360
IENGTHERVV VLFERCVISC ALYEEFWIKY AKYMENHSIE GVRHVFSRAC TVHLPKKPMA 420
HMLWAAFEEQ QGNINEARII LRTFEECVLG LAMVRLRRVS LERRHGNMEE AEHLLQDAIR 480
NAKSNNESSF YAIKLARHLF KIQKNLPKSR KVLLEAIEKD KENTKLYLNL LEMEYSCDLK 540
QNEENILNCF DKAIHGSLPI KMRITFSQRK VEFLEDFGSD VNKLLNAYDE HQTLLKEQDT 600
LKRKAENGSE EPEEKKAHTE DVSSAQIIDG DLQANQAAYN YSAWYQYNYQ NPWNYGQYYP 660
PPPT 664 
Gene Ontology
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0006396; P:RNA processing; IEA:InterPro. 
Interpro
 IPR003107; HAT.
 IPR011990; TPR-like_helical. 
Pfam
  
SMART
 SM00386; HAT 
PROSITE
  
PRINTS