CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-045563
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Ddx43 
Protein Synonyms/Alias
  
Gene Name
 LOC682138 
Gene Synonyms/Alias
 Ddx43 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
132TVIDNVVKKQQNYIPacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; Helicase; Hydrolase; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 646 AA 
Protein Sequence
MSRRESAANA SSSGVASRRS STGSRGAERT ATEEGNRRGR VGSRGAGGGW REPAGAAEAT 60
AASRREPPLC FGVKNDVVGA VIGRGGSKIR EIQNTTNTRI QVIKGNPEAE IKIFGNKAMQ 120
TKAKTVIDNV VKKQQNYIPG HRVDIIAFQP TVGTDTSTSE SVTDDQPLID WDQIREDALK 180
WEKKKWADLP PIKKNFYIES ATTSSMSQVQ IDNWRKENFN ITCDDLKDGE KRPIPNPICK 240
FEDAFHSYPE VMENIKRAGF QKPTPIQSQA WPIVLQGIDL IGVAQTGTGK TLSYLMPGFI 300
HLDSQPLARE QRNGPGMLVL TPTRELALQV EAECSKYSYG DLKSVCVYGG GDRDGQIQDV 360
SKGVDIIIAT PGRLNDLQMN NFVNLKSVTY LVLDEADKML DMGFEPQIMK ILLDVRPDRQ 420
TIMTSATWPY AVRRLAQSYL KEPMIVYVGT LDLVAVSTVK QNIIITTEEE KRTHIQTFLE 480
NMSPKDKVIV FVSRKAVADH LSSDLILRHI SVESLHGNRE QSDREKALEN FKTGKVRILI 540
ATDLASRGLD VHDITHVYNY DFPRNIEEYV HRVGRTGRAG RTGMSITLIT RNDWRIATEL 600
INILERANQN IPEELVLMAE RYKANKLKRE MEKKMGRPQG KPQKFY 646 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro. 
Interpro
 IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
 IPR014001; Helicase_ATP-bd.
 IPR001650; Helicase_C.
 IPR004087; KH_dom.
 IPR004088; KH_dom_type_1.
 IPR027417; P-loop_NTPase.
 IPR000629; RNA-helicase_DEAD-box_CS.
 IPR014014; RNA_helicase_DEAD_Q_motif. 
Pfam
 PF00270; DEAD
 PF00271; Helicase_C
 PF00013; KH_1 
SMART
 SM00487; DEXDc
 SM00490; HELICc
 SM00322; KH 
PROSITE
 PS00039; DEAD_ATP_HELICASE
 PS51192; HELICASE_ATP_BIND_1
 PS51194; HELICASE_CTER
 PS50084; KH_TYPE_1
 PS51195; Q_MOTIF 
PRINTS