CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026938
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, isoform CRA_a 
Protein Synonyms/Alias
  
Gene Name
 Smarcb1 
Gene Synonyms/Alias
 mCG_3118 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
8MMMMALSKTFGQKPVubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 385 AA 
Protein Sequence
MMMMALSKTF GQKPVKFQLE DDGEFYMIGS EVGNYLRMFR GSLYKRYPSL WRRLATVEER 60
KKIVASSHGK KTKPNTKDHG YTTLATSVTL LKASEVEEIL DGNDEKYKAV SISTEPPTYL 120
REQKAKRNSQ WVPTLPNSSH HLDAVPCSTT INRNRMGRDK KRTFPLCFDD HDPAVIHENA 180
SQPEVLVPIR LDMEIDGQKL RDAFTWNMNE KLMTPEMFSE ILCDDLDLNP LTFVPAIASA 240
IRQQIESYPT DSILEDQSDQ RVIIKLNIHV GNISLVDQFE WDMSEKENSP EKFALKLCSE 300
LGLGGEFVTT IAYSIRGQLS WHQKTYAFSE NPLPTVEIAI RNTGDADQWC PLLETLTDAE 360
MEKKIRDQDR NTRRMRRLAN TAPAW 385 
Gene Ontology
 GO:0000228; C:nuclear chromosome; IEA:InterPro.
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0016514; C:SWI/SNF complex; IDA:MGI.
 GO:0001741; C:XY body; IDA:MGI.
 GO:0003713; F:transcription coactivator activity; IEA:Compara.
 GO:0043044; P:ATP-dependent chromatin remodeling; IBA:RefGenome.
 GO:0001835; P:blastocyst hatching; IMP:MGI.
 GO:0030154; P:cell differentiation; IMP:MGI.
 GO:0006281; P:DNA repair; IBA:RefGenome.
 GO:0044772; P:mitotic cell cycle phase transition; IBA:RefGenome.
 GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.
 GO:0006337; P:nucleosome disassembly; IBA:RefGenome.
 GO:0043923; P:positive regulation by host of viral transcription; IEA:Compara.
 GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IEA:Compara.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IBA:RefGenome.
 GO:0045090; P:retroviral genome replication; IEA:Compara. 
Interpro
 IPR006939; SNF5.
 IPR017393; SWI_SNF_chromatin_remodel_cplx. 
Pfam
 PF04855; SNF5 
SMART
  
PROSITE
  
PRINTS