CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011843
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pre-mRNA-splicing factor PRP46 
Protein Synonyms/Alias
 Complexed with CEF1 protein 1; PRP nineteen-associated complex protein 50; PRP19-associated complex protein 50; Pre-mRNA-processing protein 46 
Gene Name
 PRP46 
Gene Synonyms/Alias
 CWC1; NTC50; YPL151C; P2594 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
7*MDGNDHKVENLGDVacetylation[1]
16ENLGDVDKFYSRIRWacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Involved in pre-mRNA splicing. May also be required for cell cycle progression at G2/M (By similarity). 
Sequence Annotation
 REPEAT 137 168 WD 1.
 REPEAT 180 210 WD 2.
 REPEAT 222 252 WD 3.
 REPEAT 264 294 WD 4.
 REPEAT 306 335 WD 5.
 REPEAT 348 377 WD 6.
 REPEAT 397 427 WD 7.  
Keyword
 Cell cycle; Complete proteome; Cytoplasm; Direct protein sequencing; mRNA processing; mRNA splicing; Nucleus; Reference proteome; Repeat; Spliceosome; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 451 AA 
Protein Sequence
MDGNDHKVEN LGDVDKFYSR IRWNNQFSYM ATLPPHLQSE MEGQKSLLMR YDTYRKESSS 60
FSGEGKKVTL QHVPTDFSEA SQAVISKKDH DTHASAFVNK IFQPEVAEEL IVNRYEKLLS 120
QRPEWHAPWK LSRVINGHLG WVRCVAIDPV DNEWFITGSN DTTMKVWDLA TGKLKTTLAG 180
HVMTVRDVAV SDRHPYLFSV SEDKTVKCWD LEKNQIIRDY YGHLSGVRTV SIHPTLDLIA 240
TAGRDSVIKL WDMRTRIPVI TLVGHKGPIN QVQCTPVDPQ VVSSSTDATV RLWDVVAGKT 300
MKVLTHHKRS VRATALHPKE FSVASACTDD IRSWGLAEGS LLTNFESEKT GIINTLSINQ 360
DDVLFAGGDN GVLSFYDYKS GHKYQSLATR EMVGSLEGER SVLCSTFDKT GLRLITGEAD 420
KSIKIWKQDE TATKESEPGL AWNPNLSAKR F 451 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0000974; C:Prp19 complex; IPI:SGD.
 GO:0005681; C:spliceosomal complex; IDA:SGD.
 GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
 GO:0000398; P:mRNA splicing, via spliceosome; IMP:SGD. 
Interpro
 IPR020472; G-protein_beta_WD-40_rep.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS
 PR00320; GPROTEINBRPT.