CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026564
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CLIC4 protein 
Protein Synonyms/Alias
 Chloride intracellular channel 4, isoform CRA_b; cDNA, FLJ96000, Homo sapiens chloride intracellular channel 4 (CLIC4), mRNA 
Gene Name
 CLIC4 
Gene Synonyms/Alias
 hCG_24047 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
62TTVDLKRKPADLQNLubiquitination[1, 2]
106LCPPKYLKLSPKHPEubiquitination[1]
110KYLKLSPKHPESNTAubiquitination[1]
130AKFSAYIKNSRPEANubiquitination[1, 2]
146ALERGLLKTLQKLDEubiquitination[1, 2]
177DIKFSTRKFLDGNEMubiquitination[1]
194ADCNLLPKLHIVKVVubiquitination[2]
199LPKLHIVKVVAKKYRubiquitination[1, 2]
212YRNFDIPKEMTGIWRubiquitination[1, 2]
249IAYSDVAKRLTK***ubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 253 AA 
Protein Sequence
MALSMPLNGL KEEDKEPLIE LFVKAGSDGE SIGNCPFSQR LFMILWLKGV VFSVTTVDLK 60
RKPADLQNLA PGTHPPFITF NSEVKTDVNK IEEFLEEVLC PPKYLKLSPK HPESNTAGMD 120
IFAKFSAYIK NSRPEANEAL ERGLLKTLQK LDEYLNSPLP DEIDENSMED IKFSTRKFLD 180
GNEMTLADCN LLPKLHIVKV VAKKYRNFDI PKEMTGIWRY LTNAYSRDEF TNTCPSDKEV 240
EIAYSDVAKR LTK 253 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0016020; C:membrane; IEA:InterPro.
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0005773; C:vacuole; IEA:Compara.
 GO:0005247; F:voltage-gated chloride channel activity; IEA:InterPro.
 GO:0001525; P:angiogenesis; IEA:Compara.
 GO:0048754; P:branching morphogenesis of an epithelial tube; IEA:Compara.
 GO:0001886; P:endothelial cell morphogenesis; IEA:Compara.
 GO:0009566; P:fertilization; IEA:Compara.
 GO:0030216; P:keratinocyte differentiation; IEA:Compara.
 GO:0035264; P:multicellular organism growth; IEA:Compara.
 GO:0061299; P:retina vasculature morphogenesis in camera-type eye; IEA:Compara.
 GO:0007035; P:vacuolar acidification; IEA:Compara. 
Interpro
 IPR010987; Glutathione-S-Trfase_C-like.
 IPR017933; Glutathione_S_Trfase/Cl_chnl_C.
 IPR002946; Int_Cl_channel.
 IPR012336; Thioredoxin-like_fold. 
Pfam
  
SMART
  
PROSITE
 PS50405; GST_CTER 
PRINTS
 PR01263; INTCLCHANNEL.