CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004479
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein APA1 
Protein Synonyms/Alias
 5',5'''-P-1,P-4-tetraphosphate phosphorylase; ATP adenylyltransferase; Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase; AP,A phosphorylase; AP-4-A phosphorylase; ADP-sulfurylase 
Gene Name
 APA1 
Gene Synonyms/Alias
 DTP1; YCL050C; YCL50C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
25AFDNGNLKFIQTETTacetylation[1]
54HMPSLIEKPERGQTPacetylation[1]
138LDNEESDKRHMVFYNubiquitination[2]
167QILQMPEKFVTFQDRubiquitination[2]
284YCGMILTKNDEVFSKubiquitination[2]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Ap4A phosphorylase catabolizes Ap4N nucleotides (where N is A,C,G or U). Additionally this enzyme catalyzes the conversion of adenosine-5-phosphosulfate (AMPs) plus Pi to ADP plus sulfate, the exchange of NDP and phosphate and the synthesis of Ap4A from AMPs plus ATP. 
Sequence Annotation
 MOD_RES 2 2 N-acetylserine (Probable).
 MOD_RES 60 60 Phosphothreonine.  
Keyword
 Acetylation; ATP-binding; Complete proteome; Direct protein sequencing; Hydrolase; Nucleotide-binding; Nucleotidyltransferase; Phosphoprotein; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 321 AA 
Protein Sequence
MSIPADIASL ISDKYKSAFD NGNLKFIQTE TTKTKDPKTS MPYLISHMPS LIEKPERGQT 60
PEGEDPLGKP EEELTVIPEF GGADNKAYKL LLNKFPVIPE HTLLVTNEYQ HQTDALTPTD 120
LLTAYKLLCA LDNEESDKRH MVFYNSGPAS GSSLDHKHLQ ILQMPEKFVT FQDRLCNGKE 180
HFLPTFNTEP LQDAKVSFAH FVLPMPESEE TVDEDLLAMC YISILQRALT FFQDWLNENP 240
ELKKSYNLML TKEWICVVPR SKAFSDEMKI GFNSTGYCGM ILTKNDEVFS KITEKPELIN 300
DILLECGFPN TSGQKPNEYN Y 321 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0003877; F:ATP adenylyltransferase activity; IEA:EC.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0008796; F:bis(5'-nucleosyl)-tetraphosphatase activity; IDA:SGD.
 GO:0004780; F:sulfate adenylyltransferase (ADP) activity; IDA:SGD.
 GO:0009164; P:nucleoside catabolic process; IDA:SGD.
 GO:0009165; P:nucleotide biosynthetic process; IDA:SGD. 
Interpro
 IPR009163; ATP_adenylyltransferase.
 IPR019200; ATP_adenylylTrfase_C.
 IPR011146; HIT-like. 
Pfam
 PF09830; ATP_transf 
SMART
  
PROSITE
  
PRINTS