CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006119
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Single-stranded DNA-binding protein RIM1, mitochondrial 
Protein Synonyms/Alias
 Mitochondrial ssDNA-binding protein 
Gene Name
 RIM1 
Gene Synonyms/Alias
 YCR028C-A; YCR28C-A 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
45ANNNRYLKYSIASQPacetylation[1]
111TTLSLVQKDINLLKNacetylation[1]
117QKDINLLKNGKKLEDacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 This protein binds preferentially and cooperatively to ss-DNA. Involved in mitochondrial DNA replication. 
Sequence Annotation
 DOMAIN 19 117 SSB.  
Keyword
 Complete proteome; Direct protein sequencing; DNA replication; DNA-binding; Mitochondrion; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 135 AA 
Protein Sequence
MFLRTQARFF HATTKKMDFS KMSIVGRIGS EFTEHTSANN NRYLKYSIAS QPRRDGQTNW 60
YNITVFNEPQ INFLTEYVRK GALVYVEADA ANYVFERDDG SKGTTLSLVQ KDINLLKNGK 120
KLEDAEGQEN AASSE 135 
Gene Ontology
 GO:0042645; C:mitochondrial nucleoid; IDA:SGD.
 GO:0003697; F:single-stranded DNA binding; IDA:SGD.
 GO:0006264; P:mitochondrial DNA replication; ISS:SGD. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR000424; Primosome_PriB/ssb.
 IPR011344; ssDNA-bd. 
Pfam
 PF00436; SSB 
SMART
  
PROSITE
 PS50935; SSB 
PRINTS