CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011476
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Tumor necrosis factor receptor superfamily member 9 
Protein Synonyms/Alias
 4-1BB ligand receptor; CDw137; T-cell antigen 4-1BB homolog; T-cell antigen ILA; CD137 
Gene Name
 TNFRSF9 
Gene Synonyms/Alias
 CD137; ILA 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
219VVKRGRKKLLYIFKQubiquitination[1, 2, 3]
225KKLLYIFKQPFMRPVubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Receptor for TNFSF9/4-1BBL. Possibly active during T cell activation. 
Sequence Annotation
 REPEAT 24 45 TNFR-Cys 1.
 REPEAT 47 86 TNFR-Cys 2.
 REPEAT 87 118 TNFR-Cys 3.
 REPEAT 119 159 TNFR-Cys 4.
 REGION 214 255 Interaction with LRR-1.
 CARBOHYD 138 138 N-linked (GlcNAc...) (Potential).
 CARBOHYD 149 149 N-linked (GlcNAc...) (Potential).
 DISULFID 28 37 By similarity.
 DISULFID 31 45 By similarity.
 DISULFID 48 62 By similarity.
 DISULFID 65 78 By similarity.
 DISULFID 68 86 By similarity.
 DISULFID 88 94 By similarity.
 DISULFID 99 106 By similarity.
 DISULFID 102 117 By similarity.
 DISULFID 121 133 By similarity.
 DISULFID 139 158 By similarity.  
Keyword
 Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Membrane; Polymorphism; Receptor; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 255 AA 
Protein Sequence
MGNSCYNIVA TLLLVLNFER TRSLQDPCSN CPAGTFCDNN RNQICSPCPP NSFSSAGGQR 60
TCDICRQCKG VFRTRKECSS TSNAECDCTP GFHCLGAGCS MCEQDCKQGQ ELTKKGCKDC 120
CFGTFNDQKR GICRPWTNCS LDGKSVLVNG TKERDVVCGP SPADLSPGAS SVTPPAPARE 180
PGHSPQIISF FLALTSTALL FLLFFLTLRF SVVKRGRKKL LYIFKQPFMR PVQTTQEEDG 240
CSCRFPEEEE GGCEL 255 
Gene Ontology
 GO:0009897; C:external side of plasma membrane; IEA:Compara.
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0004872; F:receptor activity; TAS:ProtInc.
 GO:0006917; P:induction of apoptosis; TAS:ProtInc.
 GO:0008285; P:negative regulation of cell proliferation; TAS:ProtInc. 
Interpro
 IPR001368; TNFR/NGFR_Cys_rich_reg.
 IPR020413; TNFR_9. 
Pfam
 PF00020; TNFR_c6 
SMART
 SM00208; TNFR 
PROSITE
 PS00652; TNFR_NGFR_1
 PS50050; TNFR_NGFR_2 
PRINTS
 PR01924; TNFACTORR9.