CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004467
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pyruvate dehydrogenase complex protein X component, mitochondrial 
Protein Synonyms/Alias
 Dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex; E3-binding protein; Pyruvate dehydrogenase complex component E3BP 
Gene Name
 PDX1 
Gene Synonyms/Alias
 YGR193C; G7579 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
53KGGIVSWKYKVGEPFacetylation[1]
96ILKDEGSKDVDVGEPacetylation[1]
149EATQQHLKKATVTPIacetylation[1]
190ISKQKALKEIAPSGSacetylation[1]
212DVLAYLGKIPQDSVNacetylation[1]
237RLDLSNIKPIQLKPKacetylation[1]
242NIKPIQLKPKIAEQAacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Required for anchoring dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide transacetylase (E2) core of the pyruvate dehydrogenase complexes of eukaryotes. This specific binding is essential for a functional PDH complex. 
Sequence Annotation
 DOMAIN 33 107 Lipoyl-binding.
 MOD_RES 73 73 N6-lipoyllysine (By similarity).  
Keyword
 Complete proteome; Direct protein sequencing; Lipoyl; Mitochondrion; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 410 AA 
Protein Sequence
MLSAISKVST LKSCTRYLTK CNYHASAKLL AVKTFSMPAM SPTMEKGGIV SWKYKVGEPF 60
SAGDVILEVE TDKSQIDVEA LDDGKLAKIL KDEGSKDVDV GEPIAYIADV DDDLATIKLP 120
QEANTANAKS IEIKKPSADS TEATQQHLKK ATVTPIKTVD GSQANLEQTL LPSVSLLLAE 180
NNISKQKALK EIAPSGSNGR LLKGDVLAYL GKIPQDSVNK VTEFIKKNER LDLSNIKPIQ 240
LKPKIAEQAQ TKAADKPKIT PVEFEEQLVF HAPASIPFDK LSESLNSFMK EAYQFSHGTP 300
LMDTNSKYFD PIFEDLVTLS PREPRFKFSY DLMQIPKANN MQDTYGQEDI FDLLTGSDAT 360
ASSVRPVEKN LPEKNEYILA LNVSVNNKKF NDAEAKAKRF LDYVRELESF 410 
Gene Ontology
 GO:0005967; C:mitochondrial pyruvate dehydrogenase complex; IDA:SGD.
 GO:0005198; F:structural molecule activity; IDA:SGD.
 GO:0016746; F:transferase activity, transferring acyl groups; IEA:InterPro.
 GO:0006086; P:acetyl-CoA biosynthetic process from pyruvate; IDA:SGD. 
Interpro
 IPR003016; 2-oxoA_DH_lipoyl-BS.
 IPR000089; Biotin_lipoyl.
 IPR004167; E3-bd.
 IPR011053; Single_hybrid_motif. 
Pfam
 PF00364; Biotin_lipoyl 
SMART
  
PROSITE
 PS50968; BIOTINYL_LIPOYL
 PS00189; LIPOYL 
PRINTS