CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004638
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Tyrosine-protein phosphatase non-receptor type 1 
Protein Synonyms/Alias
 Protein-tyrosine phosphatase 1B; PTP-1B 
Gene Name
 PTPN1 
Gene Synonyms/Alias
 PTP1B 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
5***MEMEKEFEQIDKubiquitination[1]
58PFDHSRIKLHQEDNDubiquitination[1]
239LLLMDKRKDPSSVDIubiquitination[1]
248PSSVDIKKVLLEMRKubiquitination[1]
335FPNHQWVKEETQEDKsumoylation[2]
347EDKDCPIKEEKGSPLsumoylation[2]
350DCPIKEEKGSPLNAAubiquitination[3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Regulation of protein tyrosine phosphatase 1B by sumoylation.
 Dadke S, Cotteret S, Yip SC, Jaffer ZM, Haj F, Ivanov A, Rauscher F 3rd, Shuai K, Ng T, Neel BG, Chernoff J.
 Nat Cell Biol. 2007 Jan;9(1):80-5. [PMID: 17159996]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Tyrosine-protein phosphatase which acts as a regulator of endoplasmic reticulum unfolded protein response. Mediates dephosphorylation of EIF2AK3/PERK; inactivating the protein kinase activity of EIF2AK3/PERK. May play an important role in CKII- and p60c-src-induced signal transduction cascades. May regulate the EFNA5-EPHA3 signaling pathway which modulates cell reorganization and cell-cell repulsion. 
Sequence Annotation
 DOMAIN 3 277 Tyrosine-protein phosphatase.
 REGION 215 221 Substrate binding (By similarity).
 ACT_SITE 215 215 Phosphocysteine intermediate.
 BINDING 181 181 Substrate.
 BINDING 262 262 Substrate (By similarity).
 MOD_RES 1 1 N-acetylmethionine.
 MOD_RES 20 20 Phosphotyrosine.
 MOD_RES 50 50 Phosphoserine; by PKB/AKT1, CLK1 and
 MOD_RES 66 66 Phosphotyrosine; by EGFR.
 MOD_RES 215 215 Cysteine persulfide.
 MOD_RES 215 215 S-nitrosocysteine; in reversibly
 MOD_RES 242 242 Phosphoserine; by CLK1 and CLK2.
 MOD_RES 243 243 Phosphoserine; by CLK1 and CLK2.
 MOD_RES 352 352 Phosphoserine.
 MOD_RES 378 378 Phosphoserine; by PKC.
 MOD_RES 386 386 Phosphoserine; by CDK1.
 MOD_RES 393 393 Phosphoserine (By similarity).
 CROSSLNK 215 216 N,N-(cysteine-1,S-diyl)serine (Cys-Ser);  
Keyword
 3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Endoplasmic reticulum; Hydrolase; Membrane; Oxidation; Phosphoprotein; Polymorphism; Protein phosphatase; Reference proteome; S-nitrosylation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 435 AA 
Protein Sequence
MEMEKEFEQI DKSGSWAAIY QDIRHEASDF PCRVAKLPKN KNRNRYRDVS PFDHSRIKLH 60
QEDNDYINAS LIKMEEAQRS YILTQGPLPN TCGHFWEMVW EQKSRGVVML NRVMEKGSLK 120
CAQYWPQKEE KEMIFEDTNL KLTLISEDIK SYYTVRQLEL ENLTTQETRE ILHFHYTTWP 180
DFGVPESPAS FLNFLFKVRE SGSLSPEHGP VVVHCSAGIG RSGTFCLADT CLLLMDKRKD 240
PSSVDIKKVL LEMRKFRMGL IQTADQLRFS YLAVIEGAKF IMGDSSVQDQ WKELSHEDLE 300
PPPEHIPPPP RPPKRILEPH NGKCREFFPN HQWVKEETQE DKDCPIKEEK GSPLNAAPYG 360
IESMSQDTEV RSRVVGGSLR GAQAASPAKG EPSLPEKDED HALSYWKPFL VNMCVATVLT 420
AGAYLCYRFL FNSNT 435 
Gene Ontology
 GO:0031410; C:cytoplasmic vesicle; IEA:Compara.
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005769; C:early endosome; IDA:UniProtKB.
 GO:0005783; C:endoplasmic reticulum; IDA:HPA.
 GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
 GO:0004725; F:protein tyrosine phosphatase activity; IDA:UniProtKB.
 GO:0008270; F:zinc ion binding; IDA:UniProtKB.
 GO:0031532; P:actin cytoskeleton reorganization; IMP:UniProtKB.
 GO:0030968; P:endoplasmic reticulum unfolded protein response; IDA:UniProtKB.
 GO:0008286; P:insulin receptor signaling pathway; IEA:Compara.
 GO:0060333; P:interferon-gamma-mediated signaling pathway; TAS:Reactome.
 GO:0060397; P:JAK-STAT cascade involved in growth hormone signaling pathway; TAS:Reactome.
 GO:0046627; P:negative regulation of insulin receptor signaling pathway; NAS:BHF-UCL.
 GO:0030168; P:platelet activation; TAS:Reactome.
 GO:0030100; P:regulation of endocytosis; IDA:UniProtKB.
 GO:0060334; P:regulation of interferon-gamma-mediated signaling pathway; TAS:Reactome.
 GO:0060338; P:regulation of type I interferon-mediated signaling pathway; TAS:Reactome.
 GO:0060337; P:type I interferon-mediated signaling pathway; TAS:Reactome. 
Interpro
 IPR012265; Ptpn1/Ptpn2.
 IPR000387; Tyr/Dual-sp_Pase.
 IPR016130; Tyr_Pase_AS.
 IPR000242; Tyr_Pase_rcpt/non-rcpt. 
Pfam
 PF00102; Y_phosphatase 
SMART
 SM00194; PTPc 
PROSITE
 PS00383; TYR_PHOSPHATASE_1
 PS50056; TYR_PHOSPHATASE_2
 PS50055; TYR_PHOSPHATASE_PTP 
PRINTS
 PR00700; PRTYPHPHTASE.