CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-027566
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNASEH2B protein 
Protein Synonyms/Alias
  
Gene Name
 RNASEH2B 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
230ELSDDLSKYLKLPEPubiquitination[1]
284SKMTAAQKALAKVDKubiquitination[2]
295KVDKSGMKSIDTFFGacetylation[3]
295KVDKSGMKSIDTFFGubiquitination[2]
Reference
 [1] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 331 AA 
Protein Sequence
MAAGVDCGDG VGARQHVFLV SEYLKDASKK MKNGLMFVKL VNPCSGEGAI YLFNMCLQQL 60
FEVKVFKEKH HSWFINQSVQ SGGLLHFATP VDPLFLLLHY LIKADKEGKF QPLDQVVVDN 120
VFPNCILLLK LPGLEKLLHH VTEEKGNPEI DNKKYYKYSK EKTLKWLEKK VNQTVAALKT 180
NNVNVSSRVQ STAFFSGDQA STDKEKDYIR YAHGLISDYI PKELSDDLSK YLKLPEPSAS 240
LPNPPSKKIK LSDEPVEAKE DYTKFNTKDL KTEKKNSKMT AAQKALAKVD KSGMKSIDTF 300
FGVKKKLERF ETLKIKSSKN ICFLHVSVCP S 331 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro. 
Interpro
 IPR019024; RNase_H2_suB. 
Pfam
 PF09468; RNase_H2-Ydr279 
SMART
  
PROSITE
  
PRINTS