CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008542
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ephrin-A4 
Protein Synonyms/Alias
 EPH-related receptor tyrosine kinase ligand 4; LERK-4 
Gene Name
 EFNA4 
Gene Synonyms/Alias
 EPLG4; LERK4 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
111GHVQFSEKIQRFTPFubiquitination[1]
154LQVSVCCKERKSESAubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Cell surface GPI-bound ligand for Eph receptors, a family of receptor tyrosine kinases which are crucial for migration, repulsion and adhesion during neuronal, vascular and epithelial development. Binds promiscuously Eph receptors residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. May play a role in the interaction between activated B-lymphocytes and dendritic cells in tonsils. 
Sequence Annotation
 DOMAIN 26 155 Ephrin RBD.
 LIPID 170 170 GPI-anchor amidated serine (Potential).
 CARBOHYD 33 33 N-linked (GlcNAc...) (Potential).
 DISULFID 58 99 By similarity.
 DISULFID 86 144 By similarity.  
Keyword
 Alternative splicing; Cell membrane; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; GPI-anchor; Lipoprotein; Membrane; Reference proteome; Secreted; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 201 AA 
Protein Sequence
MRLLPLLRTV LWAAFLGSPL RGGSSLRHVV YWNSSNPRLL RGDAVVELGL NDYLDIVCPH 60
YEGPGPPEGP ETFALYMVDW PGYESCQAEG PRAYKRWVCS LPFGHVQFSE KIQRFTPFSL 120
GFEFLPGETY YYISVPTPES SGQCLRLQVS VCCKERKSES AHPVGSPGES GTSGWRGGDT 180
PSPLCLLLLL LLLILRLLRI L 201 
Gene Ontology
 GO:0031225; C:anchored to membrane; IEA:UniProtKB-KW.
 GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0005005; F:transmembrane-ephrin receptor activity; TAS:ProtInc.
 GO:0007267; P:cell-cell signaling; TAS:ProtInc. 
Interpro
 IPR008972; Cupredoxin.
 IPR001799; Ephrin.
 IPR019765; Ephrin_CS. 
Pfam
 PF00812; Ephrin 
SMART
  
PROSITE
 PS01299; EPHRIN_RBD_1
 PS51551; EPHRIN_RBD_2 
PRINTS
 PR01347; EPHRIN.