CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012891
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 tRNA (guanine(37)-N1)-methyltransferase 
Protein Synonyms/Alias
 M1G-methyltransferase; tRNA [GM37] methyltransferase; tRNA methyltransferase 5 homolog 
Gene Name
 TRMT5 
Gene Synonyms/Alias
 KIAA1393; TRM5 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
264GEQNMMTKVRENNYTubiquitination[1]
344LYNCKLNKVDQKVKVacetylation[2]
348KLNKVDQKVKVFNLDacetylation[2]
502AEAFSDEKTQIVSNTubiquitination[3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding. 
Sequence Annotation
 REGION 327 328 S-adenosyl-L-methionine binding (By
 REGION 355 356 S-adenosyl-L-methionine binding (By
 BINDING 289 289 S-adenosyl-L-methionine (By similarity).
 BINDING 387 387 S-adenosyl-L-methionine (By similarity).  
Keyword
 Complete proteome; Cytoplasm; Methyltransferase; Mitochondrion; Nucleus; Polymorphism; Reference proteome; S-adenosyl-L-methionine; Transferase; tRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 509 AA 
Protein Sequence
MVLWILWRPF GFSGRFLKLE SHSITESKSL IPVAWTSLTQ MLLEAPGIFL LGQRKRFSTM 60
PETETHERET ELFSPPSDVR GMTKLDRTAF KKTVNIPVLK VRKEIVSKLM RSLKRAALQR 120
PGIRRVIEDP EDKESRLIML DPYKIFTHDS FEKAELSVLE QLNVSPQISK YNLELTYEHF 180
KSEEILRAVL PEGQDVTSGF SRIGHIAHLN LRDHQLSFKH LIGQVMIDKN PGITSAVNKI 240
NNIDNMYRNF QMEVLSGEQN MMTKVRENNY TYEFDFSKVY WNPRLSTEHS RITELLKPGD 300
VLFDVFAGVG PFAIPVAKKN CTVFANDLNP ESHKWLLYNC KLNKVDQKVK VFNLDGKDFL 360
QGPVKEELMQ LLGLSKERKP SVHVVMNLPA KAIEFLSAFK WLLDGQPCSS EFLPIVHCYS 420
FSKDANPAED VRQRAGAVLG ISLEACSSVH LVRNVAPNKE MLCITFQIPA SVLYKNQTRN 480
PENHEDPPLK RQRTAEAFSD EKTQIVSNT 509 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0052906; F:tRNA (guanine(37)-N(1))-methyltransferase activity; IEA:EC. 
Interpro
 IPR025792; tRNA_Gua_MeTrfase_euk.
 IPR003402; tRNA_Trfase_Trm5/Tyw2. 
Pfam
 PF02475; Met_10 
SMART
  
PROSITE
  
PRINTS