CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005936
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Desmin 
Protein Synonyms/Alias
  
Gene Name
 Des 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
43PRAGFGTKGSSSSMTubiquitination[1]
108LATRTNEKVELQELNubiquitination[1]
124RFANYIEKVRFLEQQubiquitination[1]
192DLQRLKAKLQEEIQLubiquitination[1]
240EEIAFLKKVHEEEIRubiquitination[1]
286QYETIAAKNISEAEEubiquitination[1]
296SEAEEWYKSKVSDLTubiquitination[1]
308DLTQAANKNNDALRQubiquitination[1]
317NDALRQAKQEMMEYRubiquitination[1]
338TCEIDALKGTNDSLMubiquitination[1]
448TKKTVMIKTIETRDGubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Desmin are class-III intermediate filaments found in muscle cells. In adult striated muscle they form a fibrous network connecting myofibrils to each other and to the plasma membrane from the periphery of the Z-line structures. 
Sequence Annotation
 REGION 1 108 Head.
 REGION 109 411 Rod.
 REGION 109 140 Coil 1A.
 REGION 141 150 Linker 1.
 REGION 151 251 Coil 1B.
 REGION 252 267 Linker 12.
 REGION 268 286 Coil 2A.
 REGION 287 294 Linker 2.
 REGION 295 411 Coil 2B.
 REGION 412 469 Tail.
 MOD_RES 12 12 Phosphoserine; by AURKB (By similarity).
 MOD_RES 17 17 Phosphothreonine; by AURKB (By
 MOD_RES 58 58 ADP-ribosylarginine (By similarity).
 MOD_RES 60 60 Phosphoserine; by AURKB (By similarity).  
Keyword
 ADP-ribosylation; Coiled coil; Complete proteome; Cytoplasm; Intermediate filament; Muscle protein; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 469 AA 
Protein Sequence
MSQAYSSSQR VSSYRRTFGG APGFSLGSPL SSPVFPRAGF GTKGSSSSMT SRVYQVSRTS 60
GGAGGLGSLR SSRLGTTRAP SYGAGELLDF SLADAVNQEF LATRTNEKVE LQELNDRFAN 120
YIEKVRFLEQ QNAALAAEVN RLKGREPTRV AELYEEEMRE LRRQVEVLTN QRARVDVERD 180
NLIDDLQRLK AKLQEEIQLR EEAENNLAAF RADVDAATLA RIDLERRIES LNEEIAFLKK 240
VHEEEIRELQ AQLQEQQVQV EMDMSKPDLT AALRDIRAQY ETIAAKNISE AEEWYKSKVS 300
DLTQAANKNN DALRQAKQEM MEYRHQIQSY TCEIDALKGT NDSLMRQMRE LEDRFASEAN 360
GYQDNIARLE EEIRHLKDEM ARHLREYQDL LNVKMALDVE IATYRKLLEG EESRINLPIQ 420
TFSALNFRET SPEQRGSEVH TKKTVMIKTI ETRDGEVVSE ATQQQHEVL 469 
Gene Ontology
 GO:0005856; C:cytoskeleton; IDA:MGI.
 GO:0005916; C:fascia adherens; IDA:MGI.
 GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
 GO:0031594; C:neuromuscular junction; IDA:MGI.
 GO:0042383; C:sarcolemma; IDA:MGI.
 GO:0030018; C:Z disc; IDA:MGI.
 GO:0005200; F:structural constituent of cytoskeleton; TAS:MGI.
 GO:0007517; P:muscle organ development; TAS:MGI. 
Interpro
 IPR016044; F.
 IPR001664; IF.
 IPR006821; Intermed_filament_DNA-bd.
 IPR018039; Intermediate_filament_CS. 
Pfam
 PF00038; Filament
 PF04732; Filament_head 
SMART
  
PROSITE
 PS00226; IF 
PRINTS