CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007489
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pyrimidine-specific ribonucleoside hydrolase RihA 
Protein Synonyms/Alias
 Cytidine/uridine-specific hydrolase 
Gene Name
 rihA 
Gene Synonyms/Alias
 ybeK; b0651; JW0646 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
44AGNQTPEKTLRNVLRacetylation[1, 2]
Reference
 [1] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [2] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively. 
Sequence Annotation
 ACT_SITE 240 240 By similarity.  
Keyword
 3D-structure; Complete proteome; Glycosidase; Hydrolase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 311 AA 
Protein Sequence
MALPILLDCD PGHDDAIAIV LALASPELDV KAITSSAGNQ TPEKTLRNVL RMLTLLNRTD 60
IPVAGGAVKP LMRELIIADN VHGESGLDGP ALPEPTFAPQ NCTAVELMAK TLRESAEPVT 120
IVSTGPQTNV ALLLNSHPEL HSKIARIVIM GGAMGLGNWT PAAEFNIYVD PEAAEIVFQS 180
GIPVVMAGLD VTHKAQIHVE DTERFRAIGN PVSTIVAELL DFFLEYHKDE KWGFVGAPLH 240
DPCTIAWLLK PELFTSVERW VGVETQGKYT QGMTVVDYYY LTGNKPNATV MVDVDRQGFV 300
DLLADRLKFY A 311 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:InterPro.
 GO:0005509; F:calcium ion binding; IDA:EcoCyc.
 GO:0047405; F:pyrimidine-5'-nucleotide nucleosidase activity; IDA:EcoliWiki.
 GO:0045437; F:uridine nucleosidase activity; IDA:EcoCyc.
 GO:0015949; P:nucleobase-containing small molecule interconversion; IEA:InterPro.
 GO:0006206; P:pyrimidine nucleobase metabolic process; IEA:HAMAP.
 GO:0046133; P:pyrimidine ribonucleoside catabolic process; IMP:EcoCyc. 
Interpro
 IPR015910; I/U_nuclsd_hydro_CS.
 IPR023186; Inosine/uridine_hydrolase.
 IPR001910; Inosine/uridine_hydrolase_dom.
 IPR022975; Pyrim_hydro_RihA. 
Pfam
 PF01156; IU_nuc_hydro 
SMART
  
PROSITE
 PS01247; IUNH 
PRINTS