CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019179
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNA binding motif protein, X-linked-like-1 
Protein Synonyms/Alias
 Heterogeneous nuclear ribonucleoprotein G-like 1 
Gene Name
 RBMXL1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
9VEADRPGKLFIGGLNubiquitination[1]
22LNTETNEKALETVFGubiquitination[2]
30ALETVFGKYGRIVEVubiquitination[1]
63FESPADAKDAARDMNubiquitination[2]
217RDDGYSTKDSYSSRDubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 RNA-binding protein which may be involved in pre-mRNA splicing (By similarity). 
Sequence Annotation
 DOMAIN 8 86 RRM.
 MOD_RES 88 88 Phosphoserine.
 MOD_RES 161 161 Phosphoserine.
 MOD_RES 208 208 Phosphoserine (By similarity).  
Keyword
 Complete proteome; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 390 AA 
Protein Sequence
MVEADRPGKL FIGGLNTETN EKALETVFGK YGRIVEVLLI KDRETNKSRG FAFVTFESPA 60
DAKDAARDMN GKSLDGKAIK VEQATKPSFE RGRHGPPPPP RSRGPPRGFG AGRGGSGGTR 120
GPPSRGGHMD DGGYSMNFNM SSSRGPLPVK RGPPPRSGGP SPKRSAPSGL VRSSSGMGGR 180
APLSRGRDSY GGPPRREPLP SRRDVYLSPR DDGYSTKDSY SSRDYPSSRD TRDYAPPPRD 240
YTYRDYGHSS SRDDYPSRGY GDRDGYGRDR DYSDHPSGGS YRDSYESYGN SRSAPLTRGP 300
PPSYGGSSRY DDYSSSRDGY GGSRDSYSSS RSDLYSSCDR VGRQERGLPP SVERGYPSSR 360
DSYSSSSRGA PRGAGPGGSR SDRGGGRSRY 390 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR012604; RBM1CTR.
 IPR000504; RRM_dom. 
Pfam
 PF08081; RBM1CTR
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS