CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043978
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 AT-rich interactive domain-containing protein 4A 
Protein Synonyms/Alias
  
Gene Name
 ARID4A 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
23YKDLNLFKLFRLVYHubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 748 AA 
Protein Sequence
MEDRGTPINK PPVLGYKDLN LFKLFRLVYH QGGCDNIDSG AVWKQIYMDL GIPILNSAAS 60
YNVKTAYRKY LYGFEEYCRS ANIQFRTVHH HEPKVKEEKK DLEESMEEAL KLDQEMPLTE 120
VKSEPEENID SNSESEREEI ELKSPRGRRR IARDVNSIKK EIEEEKTEDK LKDNDTENKD 180
VDDDYETAEK KENELLLGRK NTPKQKEKKI KKQEDSDKDS DEEEEKSQER EETESKCDSE 240
GEEDEEDMEP CLTGTKVKVK YGRGKTQKIY EASIKSTEID DGEVLYLVHY YGWNVRYDEW 300
VKADRIIWPL DKGGPKKKQK KKAKNKEDSE KDEKRDEERQ KSKRGRPPLK STLSSNMPYG 360
LSKTANSEGK SDSCSSDSET EDALEKNLIN EELSLKDELE KNENLNDDKL DEENPKISAH 420
ILKENDRTQM QPLETLKLEV GENEQIVQIF GNKMEKTEEV KKEAEKSPKG KGRRSKTKDL 480
SLEIIKISSF GQNEAGSEPH IEAHSLELSS LDNKNFSSAT EDEIDQCVKE KKLKRKILGQ 540
SSPEKKIRIE NGMEMTNTVS QERTSDCIGS EGMKNLNFEQ HFERENEGMP SLIAESNQCI 600
QQLTSERFDS PAEETVNIPL KEDEDAMPLI GPETLVCHEV DLDDLDEKDK TSIEDVAVES 660
SESNSLVSIP PALPPVVQHN FSVASPLTLS QDESRSVKSE SDITIEVDSI AEESQEGLCE 720
RESANGFETN VASGTCSIIV QERESREK 748 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:InterPro. 
Interpro
 IPR001606; ARID/BRIGHT_DNA-bd.
 IPR000953; Chromo_domain/shadow.
 IPR016197; Chromodomain-like.
 IPR025995; Tudor-knot. 
Pfam
 PF01388; ARID
 PF11717; Tudor-knot 
SMART
 SM00501; BRIGHT
 SM00298; CHROMO 
PROSITE
 PS51011; ARID 
PRINTS