CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012824
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein CLEC16A 
Protein Synonyms/Alias
  
Gene Name
 CLEC16A 
Gene Synonyms/Alias
 KIAA0350 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
367PSIRCFIKPTETLERubiquitination[1]
404GEEEDEEKGPTEDAQubiquitination[2]
445MVIMERSKLSELAASubiquitination[1, 2, 3, 4, 5, 6]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [5] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [6] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
  
Sequence Annotation
  
Keyword
 Alternative splicing; Complete proteome; Diabetes mellitus; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1053 AA 
Protein Sequence
MFGRSRSWVG GGHGKTSRNI HSLDHLKYLY HVLTKNTTVT EQNRNLLVET IRSITEILIW 60
GDQNDSSVFD FFLEKNMFVF FLNILRQKSG RYVCVQLLQT LNILFENISH ETSLYYLLSN 120
NYVNSIIVHK FDFSDEEIMA YYISFLKTLS LKLNNHTVHF FYNEHTNDFA LYTEAIKFFN 180
HPESMVRIAV RTITLNVYKV SLDNQAMLHY IRDKTAVPYF SNLVWFIGSH VIELDDCVQT 240
DEEHRNRGKL SDLVAEHLDH LHYLNDILII NCEFLNDVLT DHLLNRLFLP LYVYSLENQD 300
KGGERPKISL PVSLYLLSQV FLIIHHAPLV NSLAEVILNG DLSEMYAKTE QDIQRSSAKP 360
SIRCFIKPTE TLERSLEMNK HKGKRRVQKR PNYKNVGEEE DEEKGPTEDA QEDAEKAKGT 420
EGGSKGIKTS GESEEIEMVI MERSKLSELA ASTSVQEQNT TDEEKSAAAT CSESTQWSRP 480
FLDMVYHALD SPDDDYHALF VLCLLYAMSH NKGMDPEKLE RIQLPVPNAA EKTTYNHPLA 540
ERLIRIMNNA AQPDGKIRLA TLELSCLLLK QQVLMSAGCI MKDVHLACLE GAREESVHLV 600
RHFYKGEDIF LDMFEDEYRS MTMKPMNVEY LMMDASILLP PTGTPLTGID FVKRLPCGDV 660
EKTRRAIRVF FMLRSLSLQL RGEPETQLPL TREEDLIKTD DVLDLNNSDL IACTVITKDG 720
GMVQRFLAVD IYQMSLVEPD VSRLGWGVVK FAGLLQDMQV TGVEDDSRAL NITIHKPASS 780
PHSKPFPILQ ATFIFSDHIR CIIAKQRLAK GRIQARRMKM QRIAALLDLP IQPTTEVLGF 840
GLGSSTSTQH LPFRFYDQGR RGSSDPTVQR SVFASVDKVP GFAVAQCINQ HSSPSLSSQS 900
PPSASGSPSG SGSTSHCDSG GTSSSSTPST AQSPADAPMS PELPKPHLPD QLVIVNETEA 960
DSKPSKNVAR SAAVETASLS PSLVPARQPT ISLLCEDTAD TLSVESLTLV PPVDPHSLRS 1020
LTGMPPLSTP AAACTEPVGE EAACAEPVGT AED 1053 
Gene Ontology
  
Interpro
 IPR019155; Uncharacterised_FPL. 
Pfam
 PF09758; FPL 
SMART
  
PROSITE
  
PRINTS