CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002006
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Complement component C9 
Protein Synonyms/Alias
 Complement component C9a; Complement component C9b 
Gene Name
 C9 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
378GVELKDIKRCLGYHLubiquitination[1]
483IYNLVPVKMKNAHLKubiquitination[1]
485NLVPVKMKNAHLKKQubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Constituent of the membrane attack complex (MAC) that plays a key role in the innate and adaptive immune response by forming pores in the plasma membrane of target cells. C9 is the pore-forming subunit of the MAC. 
Sequence Annotation
 DOMAIN 42 95 TSP type-1.
 DOMAIN 99 136 LDL-receptor class A.
 DOMAIN 138 509 MACPF.
 DOMAIN 510 540 EGF-like.
 CARBOHYD 48 48 C-linked (Man).
 CARBOHYD 51 51 C-linked (Man); partial.
 CARBOHYD 277 277 N-linked (GlcNAc...).
 CARBOHYD 415 415 N-linked (GlcNAc...).
 DISULFID 43 78
 DISULFID 54 57
 DISULFID 88 94
 DISULFID 101 112
 DISULFID 107 125
 DISULFID 119 134
 DISULFID 142 181
 DISULFID 254 255
 DISULFID 380 405
 DISULFID 510 526
 DISULFID 513 528
 DISULFID 530 539  
Keyword
 Cell membrane; Complement alternate pathway; Complement pathway; Complete proteome; Cytolysis; Direct protein sequencing; Disease mutation; Disulfide bond; EGF-like domain; Glycoprotein; Immunity; Innate immunity; Membrane; Membrane attack complex; Phosphoprotein; Polymorphism; Reference proteome; Secreted; Signal; Transmembrane; Transmembrane beta strand. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 559 AA 
Protein Sequence
MSACRSFAVA ICILEISILT AQYTTSYDPE LTESSGSASH IDCRMSPWSE WSQCDPCLRQ 60
MFRSRSIEVF GQFNGKRCTD AVGDRRQCVP TEPCEDAEDD CGNDFQCSTG RCIKMRLRCN 120
GDNDCGDFSD EDDCESEPRP PCRDRVVEES ELARTAGYGI NILGMDPLST PFDNEFYNGL 180
CNRDRDGNTL TYYRRPWNVA SLIYETKGEK NFRTEHYEEQ IEAFKSIIQE KTSNFNAAIS 240
LKFTPTETNK AEQCCEETAS SISLHGKGSF RFSYSKNETY QLFLSYSSKK EKMFLHVKGE 300
IHLGRFVMRN RDVVLTTTFV DDIKALPTTY EKGEYFAFLE TYGTHYSSSG SLGGLYELIY 360
VLDKASMKRK GVELKDIKRC LGYHLDVSLA FSEISVGAEF NKDDCVKRGE GRAVNITSEN 420
LIDDVVSLIR GGTRKYAFEL KEKLLRGTVI DVTDFVNWAS SINDAPVLIS QKLSPIYNLV 480
PVKMKNAHLK KQNLERAIED YINEFSVRKC HTCQNGGTVI LMDGKCLCAC PFKFEGIACE 540
ISKQKISEGL PALEFPNEK 559 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005576; C:extracellular region; TAS:Reactome.
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0005579; C:membrane attack complex; IEA:UniProtKB-KW.
 GO:0006957; P:complement activation, alternative pathway; IEA:UniProtKB-KW.
 GO:0006958; P:complement activation, classical pathway; IEA:UniProtKB-KW.
 GO:0019835; P:cytolysis; IEA:UniProtKB-KW.
 GO:0019836; P:hemolysis by symbiont of host erythrocytes; TAS:ProtInc.
 GO:0045087; P:innate immune response; TAS:Reactome. 
Interpro
 IPR023415; LDLR_class-A_CS.
 IPR002172; LDrepeatLR_classA_rpt.
 IPR001862; MAC_perforin.
 IPR020864; MACPF.
 IPR020863; MACPF_CS.
 IPR000884; Thrombospondin_1_rpt. 
Pfam
 PF00057; Ldl_recept_a
 PF01823; MACPF
 PF00090; TSP_1 
SMART
 SM00192; LDLa
 SM00457; MACPF
 SM00209; TSP1 
PROSITE
 PS00022; EGF_1
 PS01186; EGF_2
 PS50026; EGF_3
 PS01209; LDLRA_1
 PS50068; LDLRA_2
 PS00279; MACPF_1
 PS51412; MACPF_2
 PS50092; TSP1 
PRINTS
 PR00764; COMPLEMENTC9.