CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022662
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Retinol dehydrogenase 11 
Protein Synonyms/Alias
 Androgen-regulated short-chain dehydrogenase/reductase 1; Cell line MC/9.IL4-derived protein 1; M42C60; Prostate short-chain dehydrogenase/reductase 1; Retinal reductase 1; RalR1; Short-chain aldehyde dehydrogenase; SCALD 
Gene Name
 Rdh11 
Gene Synonyms/Alias
 Arsdr1; Mdt1; Psdr1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
52GANTGIGKETAKDLAubiquitination[1]
56GIGKETAKDLAQRGAubiquitination[1]
74LACRDVDKGELAAREacetylation[2]
102KLDLADTKSIRAFAKubiquitination[1, 3]
109KSIRAFAKDFLAEEKubiquitination[1]
116KDFLAEEKHLHLLINubiquitination[1]
211LANILFTKELAKRLKubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [3] BTB-ZF factors recruit the E3 ligase cullin 3 to regulate lymphoid effector programs.
 Mathew R, Seiler MP, Scanlon ST, Mao AP, Constantinides MG, Bertozzi-Villa C, Singer JD, Bendelac A.
 Nature. 2012 Nov 22;491(7425):618-21. [PMID: 23086144
Functional Description
 Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent all-trans-retinal reductase. Also involved in the metabolism of short-chain aldehydes. 
Sequence Annotation
 NP_BIND 45 51 NADP (By similarity).
 ACT_SITE 199 199 Proton acceptor (By similarity).
 BINDING 174 174 Substrate (By similarity).
 MOD_RES 109 109 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Alternative splicing; Complete proteome; Endoplasmic reticulum; Membrane; NADP; Oxidoreductase; Reference proteome; Signal-anchor; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 316 AA 
Protein Sequence
MFGFLLLLSL PFILYLVTPK IRKMLSSGVC TSNVQLPGKV AIVTGANTGI GKETAKDLAQ 60
RGARVYLACR DVDKGELAAR EIQAVTGNSQ VFVRKLDLAD TKSIRAFAKD FLAEEKHLHL 120
LINNAGVMMC PYSKTADGFE MHIGVNHLGH FLLTHLLLEK LKESAPSRIV NLSSLGHHLG 180
RIHFHNLQGE KFYSAGLAYC HSKLANILFT KELAKRLKGS GVTTYSVHPG TVHSELTRYS 240
SIMRWLWQLF FVFIKTPQEG AQTSLYCALT EGLESLSGSH FSDCQLAWVS YQGRNEIIAR 300
RLWDVSCDLL GLPVDW 316 
Gene Ontology
 GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005622; C:intracellular; ISS:UniProtKB.
 GO:0001917; C:photoreceptor inner segment; IDA:MGI.
 GO:0052650; F:NADP-retinol dehydrogenase activity; ISO:MGI.
 GO:0004745; F:retinol dehydrogenase activity; ISS:UniProtKB.
 GO:0016062; P:adaptation of rhodopsin mediated signaling; IMP:MGI.
 GO:0042574; P:retinal metabolic process; ISO:MGI.
 GO:0042572; P:retinol metabolic process; ISS:UniProtKB. 
Interpro
 IPR002198; DH_sc/Rdtase_SDR.
 IPR002347; Glc/ribitol_DH.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF00106; adh_short 
SMART
  
PROSITE
 PS00061; ADH_SHORT 
PRINTS
 PR00081; GDHRDH.
 PR00080; SDRFAMILY.