CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043837
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 WD repeat-containing protein 60 
Protein Synonyms/Alias
  
Gene Name
 WDR60 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
166SIDIQHLKRRWAAPEubiquitination[1, 2]
193EALWPEGKLHK****ubiquitination[1]
196WPEGKLHK*******ubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 196 AA 
Protein Sequence
SDPNHFIIGT DMGLISHGTR QDLRVAPKLF KPQQHGIRPV KVNVIDFSPF GEPIFLAGCS 60
DGSIRLHQLS SAFPLLQWDS STDSHAVTGL QWSPTRPAVF LVQDDTSNIY IWDLLQSDLG 120
PVAKQQVSPN RLVAMAAVGE PEKAGGSFLA LVLARASGSI DIQHLKRRWA APEVDECNRL 180
RLLLQEALWP EGKLHK 196 
Gene Ontology
 GO:0005929; C:cilium; IEA:Compara. 
Interpro
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
  
PRINTS