CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041891
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Raft-linking protein, isoform CRA_c 
Protein Synonyms/Alias
 Raftlin 
Gene Name
 RFTN1 
Gene Synonyms/Alias
 RAFTLIN; hCG_27653 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
240HEEPLSGKMEIFTLFubiquitination[1]
249EIFTLFNKPKSHQKCubiquitination[2]
408KIKKKESKFQWRFSRubiquitination[3]
443QQAEENEKNLEDQSSubiquitination[1]
451NLEDQSSKAGDMGNCubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 542 AA 
Protein Sequence
MYCDGAVDLD AAAELPGSSA VRLASLRDLP AQLLELYQQG FSLAALHPFV QPTHEREKTP 60
LEHIFRAILI KKTDRSQKTD LHNEGYILEL DCCSSLDHPT DQKLIPEFIK KIQEAASQGL 120
KFVGVIPQYH SSVNSAGSSA PVSTANSTED ARDAKNARGD HASLENEKPG TGDVCSAPAG 180
RNQSPEPSSG PRGEVPLAKQ PSSPSGEGDG GELSPQGVSK TLDGPESNPL EVHEEPLSGK 240
MEIFTLFNKP KSHQKCRQYY PVTIPLHVSK NGQTVSGLDA NWLEHMSDHF RKGGMLVNAV 300
FYLGIVNDSL HGLTDGVFIF EAVSTEDSKT IQGYDAIVVE QWTVLEGVEV QTDYVPLLNS 360
LAAYGWQLTC VLPTPVVKTT SEGSVSTKQI VFLQRPCLPQ KIKKKESKFQ WRFSREEMHN 420
RQMRKSKGKL SARDKQQAEE NEKNLEDQSS KAGDMGNCVS GQQQEGGVSE EMKGPVQEDK 480
GEQLSPGGLL CGVGVEGEAV QNGPASHSRA LVGICTGHSN PGEDARDGDA EEVRELGTVE 540
EN 542 
Gene Ontology
  
Interpro
  
Pfam
  
SMART
  
PROSITE
  
PRINTS