CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042376
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 General transcription factor 3C polypeptide 2 
Protein Synonyms/Alias
  
Gene Name
 GTF3C2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
111RLSDGSLKLYPFQCFubiquitination[1, 2]
163YEPINSIKRFLSTELubiquitination[3]
265ERRFPIYKADLIPYQubiquitination[1, 3]
292SGVPNPPKARTYTETubiquitination[1]
348LQLEAIHKVRFSPNLubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 420 AA 
Protein Sequence
XFAVLQLYSF STFPFISPFF PLLCSQDFPP LAATDAVKPA IYKVQCVATL QVGSMQATDP 60
SECGQCLSLA WMPTRPHQHL AAGYYNGMVV FWNLPTNSPL QRIRLSDGSL KLYPFQCFLA 120
HDQAVRTLQW CKANSHFLVS AGSDRKIKFW DLRRPYEPIN SIKRFLSTEL AWLLPYNGVT 180
VAQDNCYASY GLCGIHYIDA GYLGFKAYFT APRKGTVWSL SGSDWLGTIA AGDISGELIA 240
AILPDMALNP INVKRPVERR FPIYKADLIP YQDSPEGPDH SSASSGVPNP PKARTYTETV 300
NHHYLLFQDT DLGSFHDLLR REPMLRMQEG EGHSQLCLDR LQLEAIHKVR FSPNLDSYGW 360
LVSGGQSGLV RIHFVRGLAS PLGHRMQLES RAHFNAMFQP SSPTRRPGFS PTSHRLLPTP 420 
Gene Ontology
  
Interpro
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS