CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006924
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Sec sixty-one protein homolog 
Protein Synonyms/Alias
 Ssh1 complex subunit SSH1; Ssh1 complex subunit alpha 
Gene Name
 SSH1 
Gene Synonyms/Alias
 YBR283C; YBR2020 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
417RREQNVAKELNKVIPacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Part of the Ssh1 complex, which probably is the major component of a channel-forming translocon complex that may function exclusively in the cotranslational pathway of protein endoplasmic reticulum (ER) import. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Endoplasmic reticulum; Membrane; Protein transport; Reference proteome; Translocation; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 490 AA 
Protein Sequence
MSGFRLIDIV KPILPILPEV ELPFEKLPFD DKIVYTIFAG LIYLFAQFPL VGLPKATTPN 60
VNDPIYFLRG VFGCEPRTLL EFGLFPNISS GLILQLLAGL KVIKVNFKIQ SDRELFQSLT 120
KVFAIVQYVI LTNIFIFAGY FGDDLSVVQI GLINFQLVGA GIFTTLLAEV IDKGFGFSSG 180
AMIINTVVIA TNLVADTFGV SQIKVGEDDQ TEAQGALINL IQGLRSKHKT FIGGIISAFN 240
RDYLPNLTTT IIVLAIAIIV CYLQSVRVEL PIRSTRARGT NNVYPIKLLY TGCLSVLFSY 300
TILFYIHIFA FVLIQLVAKN EPTHIICKIM GHYENANNLL AVPTFPLSLL APPTSFFKGV 360
TQQPLTFITY SAFILVTGIW FADKWQAISG SSARDVALEF KDQGITLMGR REQNVAKELN 420
KVIPIAAVTG ASVLSLITVI GESLGLKGKA AGIVVGIAGG FSLLEVITIE YQQSGGQSAL 480
NQVLGVPGAM 490 
Gene Ontology
 GO:0016021; C:integral to membrane; ISM:SGD.
 GO:0071261; C:Ssh1 translocon complex; IDA:SGD.
 GO:0008320; F:protein transmembrane transporter activity; ISA:SGD.
 GO:0005048; F:signal sequence binding; IDA:SGD.
 GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IMP:SGD. 
Interpro
 IPR002208; SecY/SEC61-alpha.
 IPR023201; SecY_su_dom.
 IPR019561; Translocon_Sec61/SecY_plug_dom. 
Pfam
 PF10559; Plug_translocon
 PF00344; SecY 
SMART
  
PROSITE
 PS00755; SECY_1
 PS00756; SECY_2 
PRINTS