UniProt Accession

 G3V8C3_RAT; G3V8C3 

Genbank Protein ID

 AABR06093166; CH473990 

Genbank Nucleotide ID

 EDL78721.1 

Protein Name

 Vimentin 

Protein Synonyms/Alias

 Vimentin, isoform CRA_b 

Gene Name

 Vim 

Gene Synonyms/Alias

 rCG_55877 

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
104	KNTRTNEKVELQELN	acetylation	[1]
120	RFANYIDKVRFLEQQ	acetylation	[1]
139	LAELEQLKGQGKSRL	acetylation	[1]
168	VDQLTNDKARVEVER	acetylation	[1]
168	VDQLTNDKARVEVER	ubiquitination	[2]
188	DIMRLREKLQEEMLQ	acetylation	[1]
188	DIMRLREKLQEEMLQ	ubiquitination	[2]
223	ARLDLERKVESLQEE	acetylation	[1]
235	QEEIAFLKKLHDEEI	acetylation	[1]
282	QYESVAAKNLQEAEE	acetylation	[1]
294	AEEWYKSKFADLSEA	acetylation	[1]
313	NDALRQAKQESNEYR	acetylation	[1]
334	TCEVDALKGTNESLE	acetylation	[1]
373	QDEIQNMKEEMARHL	acetylation	[1]
439	PLVDTHSKRTLLIKT	acetylation	[1]
439	PLVDTHSKRTLLIKT	ubiquitination	[2]
445	SKRTLLIKTVETRDG	acetylation	[1]
445	SKRTLLIKTVETRDG	ubiquitination	[2]

Reference

 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 

Functional Description

  

Sequence Annotation

  

Keyword

 Coiled coil; Complete proteome; Intermediate filament; Reference proteome. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 466 AA 

Protein Sequence

Gene Ontology

 GO:0031252; C:cell leading edge; IEA:Compara.
 GO:0042995; C:cell projection; IEA:Compara.
 GO:0005829; C:cytosol; IEA:Compara.
 GO:0070062; C:extracellular vesicular exosome; IEA:Compara.
 GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
 GO:0005777; C:peroxisome; IEA:Compara.
 GO:0005886; C:plasma membrane; IEA:Compara.
 GO:0005200; F:structural constituent of cytoskeleton; IEA:Compara.
 GO:0005212; F:structural constituent of eye lens; IEA:Compara.
 GO:0014002; P:astrocyte development; IEA:Compara.
 GO:0060020; P:Bergmann glial cell differentiation; IEA:Compara.
 GO:0045109; P:intermediate filament organization; IEA:Compara.
 GO:0070307; P:lens fiber cell development; IEA:Compara.
 GO:0010977; P:negative regulation of neuron projection development; IEA:Compara. 

Interpro

 IPR016044; F.
 IPR001664; IF.
 IPR006821; Intermed_filament_DNA-bd.
 IPR018039; Intermediate_filament_CS. 

Pfam

 PF00038; Filament
 PF04732; Filament_head 

SMART

  

PROSITE

 PS00226; IF 

PRINTS