CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009785
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized Nudix hydrolase YfcD 
Protein Synonyms/Alias
  
Gene Name
 yfcD 
Gene Synonyms/Alias
 b2299; JW2296 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
111GQFYFEDKNCRVWGAacetylation[1]
159EFTPDSLKALALWMKacetylation[1]
166KALALWMKRNAKNEAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
  
Sequence Annotation
 DOMAIN 35 163 Nudix hydrolase.
 MOTIF 72 94 Nudix box.
 METAL 88 88 Magnesium.
 METAL 92 92 Magnesium (By similarity).  
Keyword
 3D-structure; Complete proteome; Hydrolase; Magnesium; Metal-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 180 AA 
Protein Sequence
MEQRRLASTE WVDIVNEENE VIAQASREQM RAQCLRHRAT YIVVHDGMGK ILVQRRTETK 60
DFLPGMLDAT AGGVVQADEQ LLESARREAE EELGIAGVPF AEHGQFYFED KNCRVWGALF 120
SCVSHGPFAL QEDEVSEVCW LTPEEITARC DEFTPDSLKA LALWMKRNAK NEAVETETAE 180 
Gene Ontology
 GO:0016817; F:hydrolase activity, acting on acid anhydrides; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. 
Interpro
 IPR000086; NUDIX_hydrolase_dom.
 IPR015797; NUDIX_hydrolase_dom-like.
 IPR024195; NUDIX_hydrolase_YfcD_pred. 
Pfam
 PF00293; NUDIX 
SMART
  
PROSITE
 PS51462; NUDIX 
PRINTS