CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012698
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Serine/arginine-rich splicing factor 7 
Protein Synonyms/Alias
 Splicing factor 9G8; Splicing factor, arginine/serine-rich 7 
Gene Name
 SRSF7 
Gene Synonyms/Alias
 SFRS7 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
24NLGTGAGKGELERAFubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Required for pre-mRNA splicing. Can also modulate alternative splicing in vitro. Represses the splicing of MAPT/Tau exon 10. 
Sequence Annotation
 DOMAIN 11 84 RRM.
 REPEAT 153 160 1.
 REPEAT 161 168 2.
 REPEAT 169 176 3.
 REPEAT 177 184 4.
 REPEAT 211 218 5; approximate.
 REPEAT 219 226 6; approximate.
 ZN_FING 104 120 CCHC-type.
 REGION 153 226 6 X 8 AA repeats of R-R-S-R-S-X-S-X.
 MOD_RES 24 24 N6-acetyllysine.
 MOD_RES 163 163 Phosphoserine (By similarity).
 MOD_RES 165 165 Phosphoserine (By similarity).
 MOD_RES 167 167 Phosphoserine (By similarity).
 MOD_RES 179 179 Phosphoserine (By similarity).
 MOD_RES 181 181 Phosphoserine (By similarity).
 MOD_RES 183 183 Phosphoserine (By similarity).
 MOD_RES 187 187 Phosphoserine (By similarity).
 MOD_RES 192 192 Phosphoserine.
 MOD_RES 194 194 Phosphoserine.
 MOD_RES 196 196 Phosphoserine.
 MOD_RES 223 223 Phosphoserine (By similarity).
 MOD_RES 225 225 Phosphoserine (By similarity).
 MOD_RES 227 227 Phosphoserine (By similarity).
 MOD_RES 231 231 Phosphoserine.
 MOD_RES 233 233 Phosphoserine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Metal-binding; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Repressor; RNA-binding; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 238 AA 
Protein Sequence
MSRYGRYGGE TKVYVGNLGT GAGKGELERA FSYYGPLRTV WIARNPPGFA FVEFEDPRDA 60
EDAVRGLDGK VICGSRVRVE LSTGMPRRSR FDRPPARRPF DPNDRCYECG EKGHYAYDCH 120
RYSRRRRSRA ENLRR 135 
Gene Ontology
 GO:0005654; C:nucleoplasm; TAS:Reactome.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.
 GO:0006406; P:mRNA export from nucleus; TAS:Reactome.
 GO:0000398; P:mRNA splicing, via spliceosome; TAS:Reactome.
 GO:0048025; P:negative regulation of mRNA splicing, via spliceosome; IDA:UniProtKB.
 GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom.
 IPR001878; Znf_CCHC. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM
 SM00343; ZnF_C2HC 
PROSITE
 PS50102; RRM
 PS50158; ZF_CCHC 
PRINTS