CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016453
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Clarin-3 
Protein Synonyms/Alias
 Transmembrane protein 12 
Gene Name
 Clrn3 
Gene Synonyms/Alias
 Tmem12 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
214RQKQEQRKPVEYAPRubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
 CARBOHYD 46 46 N-linked (GlcNAc...) (Potential).  
Keyword
 Complete proteome; Glycoprotein; Membrane; Reference proteome; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 226 AA 
Protein Sequence
MPTTQKTLMF LSGFLTSLGS VVVICSILAT QAWITSRIFF TDAISNGTIV ITYGLFRGTS 60
AQELNEGLQD LDKNFEVLGI LDNSSQKSLH LVVILLLILS LAASVLSSVF TFYNSISNPY 120
QTFLGPMGVY TWNGLSASFV FLAMVLFVGN AESNHLSDKL SQKLYPDTTN KRTTHTYGYS 180
FWLTLHVIFL NIVTAVIIIF YQKARYRQKQ EQRKPVEYAP RDGILF 226 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. 
Interpro
 IPR026748; Clarin. 
Pfam
  
SMART
  
PROSITE
  
PRINTS