CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006871
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Heterogeneous nuclear rnp K-like protein 2 
Protein Synonyms/Alias
 KH domain-containing protein 1 
Gene Name
 HEK2 
Gene Synonyms/Alias
 KHD1; YBL032W; YBL0418 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
82VKIGISEKVPGCSDRacetylation[1]
314RKFIITSKFPKNVKLacetylation[1]
343KRENYKRKLEAAEGDubiquitination[2, 3]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047]
 [3] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 RNA-binding protein involved in the correct localization of transcripts in the cell. RNA localization is a widespread mechanism for achieving localized protein synthesis. Required for the asymmetric localization to the daughter cell nucleus of the ASH1 transcript, coding for a specific repressor of transcription. Overexpression inhibits translation of the ASH1 transcript. Involved in the stability of transcripts such as the MTL1 mRNA. Involved in structural and functional organization of telomeric chromatin and regulates silencing at the HMR locus. 
Sequence Annotation
 DOMAIN 43 107 KH 1.
 DOMAIN 156 221 KH 2.
 DOMAIN 258 326 KH 3.
 MOD_RES 360 360 Phosphoserine.
 MOD_RES 362 362 Phosphoserine.  
Keyword
 Chromatin regulator; Chromosome; Complete proteome; Cytoplasm; mRNA transport; Nucleus; Phosphoprotein; Reference proteome; Repeat; RNA-binding; Telomere; Translation regulation; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 381 AA 
Protein Sequence
MSQFFEAATP VAIPTNNTNG GSSDAGSAAT GGAPVVGTTA QPTINHRLLL SLKEAAKIIG 60
TKGSTISRIR AANAVKIGIS EKVPGCSDRI LSCAGNVINV ANAIGDIVDV LNKRNPENED 120
AAEGEAEEHY YFHFLNHILP APSKDEIRDL QQLEDIGYVR LIVANSHISS IIGKAGATIK 180
SLINKHGVKI VASKDFLPAS DERIIEIQGF PGSITNVLIE ISEIILSDVD VRFSTERSYF 240
PHLKKSSGEP TSPSTSSNTR IELKIPELYV GAIIGRGMNR IKNLKTFTKT NIVVERKDDD 300
DKDENFRKFI ITSKFPKNVK LAESMLLKNL NTEIEKRENY KRKLEAAEGD ATVVTERSDS 360
ASFLEEKEEP QENHDNKEEQ S 381 
Gene Ontology
 GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.
 GO:0000784; C:nuclear chromosome, telomeric region; IDA:SGD.
 GO:0003729; F:mRNA binding; IDA:SGD.
 GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
 GO:0008298; P:intracellular mRNA localization; IMP:SGD.
 GO:0048255; P:mRNA stabilization; IMP:SGD.
 GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
 GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
 GO:0007004; P:telomere maintenance via telomerase; IPI:SGD. 
Interpro
 IPR004087; KH_dom.
 IPR004088; KH_dom_type_1. 
Pfam
 PF00013; KH_1
 PF13014; KH_3 
SMART
 SM00322; KH 
PROSITE
 PS50084; KH_TYPE_1 
PRINTS