CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019944
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 GrpE protein homolog 1, mitochondrial 
Protein Synonyms/Alias
 Mt-GrpE#1 
Gene Name
 Grpel1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
58TDPPSADKTLLEEKAacetylation[1, 2, 3]
64DKTLLEEKAKLEEQLacetylation[3]
66TLLEEKAKLEEQLREacetylation[1, 3, 4]
77QLRETMEKYKRALADacetylation[1, 3, 4, 5]
94NLRQRSQKLVEEAKLacetylation[1, 3, 4, 6]
94NLRQRSQKLVEEAKLsuccinylation[6]
100QKLVEEAKLYGIQGFacetylation[1, 3, 4, 5, 7]
120EVADILEKATQSVPKacetylation[6, 7]
120EVADILEKATQSVPKsuccinylation[6]
127KATQSVPKEEISNNNacetylation[4]
157QIQKVFTKHGLLRLDacetylation[3, 5, 7]
169RLDPIGAKFDPYEHEacetylation[6]
169RLDPIGAKFDPYEHEsuccinylation[6]
215PALVGVVKDA*****acetylation[1, 2, 4, 5, 6, 7]
215PALVGVVKDA*****succinylation[6]
Reference
 [1] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [4] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [5] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379]
 [6] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [7] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441
Functional Description
 Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins (By similarity). 
Sequence Annotation
 MOD_RES 215 215 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Chaperone; Complete proteome; Mitochondrion; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 217 AA 
Protein Sequence
MAARCVRLAR RSLPALALSF RPSPRLLCTA TKQKNNGQNL DEDLGHCEPK TDPPSADKTL 60
LEEKAKLEEQ LRETMEKYKR ALADTENLRQ RSQKLVEEAK LYGIQGFCKD LLEVADILEK 120
ATQSVPKEEI SNNNPHLKSL YEGLVMTEVQ IQKVFTKHGL LRLDPIGAKF DPYEHEALFH 180
TPVEGKEPGT VALVSKVGYK LHGRTLRPAL VGVVKDA 217 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0000774; F:adenyl-nucleotide exchange factor activity; IEA:InterPro.
 GO:0006457; P:protein folding; IEA:InterPro. 
Interpro
 IPR000740; GrpE.
 IPR013805; GrpE_coiled_coil.
 IPR009012; GrpE_head. 
Pfam
 PF01025; GrpE 
SMART
  
PROSITE
 PS01071; GRPE 
PRINTS
 PR00773; GRPEPROTEIN.