CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021878
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Proteoglycan 4 
Protein Synonyms/Alias
 Lubricin; Megakaryocyte-stimulating factor; Superficial zone proteoglycan; Proteoglycan 4 C-terminal part 
Gene Name
 Prg4 
Gene Synonyms/Alias
 Msf; Szp 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
412EPPPTTKKPEPTTPKacetylation[1]
419KPEPTTPKEPGPTTPacetylation[1]
427EPGPTTPKEPEPTTTacetylation[1]
548PEPTTPKKPEPTTPKacetylation[1]
555KPEPTTPKEPVPTTPacetylation[1]
Reference
 [1] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753
Functional Description
 Plays a role in boundary lubrication within articulating joints. Prevents protein deposition onto cartilage from synovial fluid by controlling adhesion-dependent synovial growth and inhibiting the adhesion of synovial cells to the cartilage surface. 
Sequence Annotation
 DOMAIN 26 69 SMB 1.
 DOMAIN 66 108 SMB 2.
 REPEAT 317 324 1; approximate.
 REPEAT 325 332 2; approximate.
 REPEAT 333 340 3; approximate.
 REPEAT 349 356 4; approximate.
 REPEAT 357 364 5.
 REPEAT 365 371 6; approximate.
 REPEAT 372 379 7.
 REPEAT 380 387 8.
 REPEAT 388 395 9.
 REPEAT 396 403 10.
 REPEAT 404 411 11.
 REPEAT 412 418 12; approximate.
 REPEAT 419 426 13.
 REPEAT 427 434 14.
 REPEAT 435 442 15.
 REPEAT 443 450 16; approximate.
 REPEAT 451 458 17.
 REPEAT 459 466 18.
 REPEAT 467 474 19.
 REPEAT 475 482 20.
 REPEAT 483 490 21.
 REPEAT 491 498 22.
 REPEAT 499 506 23.
 REPEAT 507 514 24.
 REPEAT 515 522 25.
 REPEAT 523 530 26.
 REPEAT 531 538 27.
 REPEAT 539 546 28.
 REPEAT 547 554 29.
 REPEAT 555 562 30.
 REPEAT 563 570 31.
 REPEAT 571 578 32.
 REPEAT 579 586 33.
 REPEAT 587 594 34.
 REPEAT 595 602 35.
 REPEAT 603 610 36.
 REPEAT 611 618 37.
 REPEAT 797 840 Hemopexin 1.
 REPEAT 841 888 Hemopexin 2.
 REGION 317 618 37 X 8 AA repeats of K-X-P-X-P-T-T-X.
 CARBOHYD 109 109 N-linked (GlcNAc...) (Potential).
 CARBOHYD 938 938 N-linked (GlcNAc...) (Potential).
 DISULFID 30 46 Alternate (By similarity).
 DISULFID 30 34 By similarity.
 DISULFID 34 64 Alternate (By similarity).
 DISULFID 44 57 Alternate (By similarity).
 DISULFID 44 46 By similarity.
 DISULFID 50 56 By similarity.
 DISULFID 57 64 By similarity.
 DISULFID 70 86 Alternate (By similarity).
 DISULFID 70 74 By similarity.
 DISULFID 74 104 Alternate (By similarity).
 DISULFID 84 97 Alternate (By similarity).
 DISULFID 84 86 By similarity.
 DISULFID 90 96 By similarity.
 DISULFID 97 104 By similarity.
 DISULFID 795 1053  
Keyword
 Alternative splicing; Complete proteome; Disulfide bond; Glycoprotein; Proteoglycan; Reference proteome; Repeat; Secreted; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1054 AA 
Protein Sequence
MGWKILPVCL SLLLPVVLIQ QVSSQDLSSC AGRCGEGYSR DATCNCDYNC QHYMECCPDF 60
KRVCSPELSC KGRCFESFAR GRECDCDSQC KQYGKCCADY DSFCEEVHNS TSPSSKTAPT 120
PAGASDTIKS TTKRSPKSPT TRTIKVVESE ELTEEHSDSE NQESSSSSSS SSSTIRKIKS 180
SKNSANRELQ KNPNVKDNKK NTPKKKPNPE PPAVDEAGSG LDNGEFKLTP PPPDPPTTPH 240
SKVATSPKTT AAKPVTPKPS LAPNSETSKE ASLASNKETT VETKETTATN KQSSASKKKT 300
TSVKETRSAE KTSDKDVEPT STTPKNSAPT TTKKPVTTTK ESKFLPLPQE PEPTTAKEPP 360
PTTKKPEPTT RKEPEPTTPK EPEPTTPKEP EPTTPKEPEP TTPKEPPPTT KKPEPTTPKE 420
PGPTTPKEPE PTTTKEPEPT TTKEPESTTR KEPEPTTPKE PEPTTPKEPE PTTLKEPEPT 480
TPKEPEPTTP KEPEPTTPKE PEPTTPKEPE PTTPKEPEPT TPKEPEPTTP KEPEPTTPKE 540
PEPTTPKKPE PTTPKEPVPT TPKEPEPTTP KEPEPTTPKE PEPTTRKEPE PTTPKEPEPT 600
TPKEPEPTTP KKPEPTTTSP KTTTLKATTL APKVTAPAEE IQNKPEETTP ASEDSDDSKT 660
TLKPQKPTKA PKPTKKPTKA PKKPTSTKKP KTPKTRKPKT TPSPLKTTSA TPELNTTPLE 720
VMLPTTTIPK QTPNPETAEV NPDHEDADGG EGEKPLIPGP PVLFPTAIPG TDLLAGRLNQ 780
GININPMLSD ETNLCNGKPV DGLTTLRNGT LVAFRGHYFW MLNPFRPPSP PRRITEVWGI 840
PSPIDTVFTR CNCEGKTFFF KDSQYWRFTN DVVDPGYPKQ IVKGFGGLTG KIVAALSIAK 900
YKDRPESVYF FKRGGNIQQY TYKQEPMKKC TGRRPAINYS VYGEAAQVRR RRFERAVGPF 960
QTHTFRIHYS VPMRVSYQDK GFLHNEVKVS TMWRGFPNVV TSAITLPNIR KPDGYDYYAF 1020
SKDQYYNIDV PTRTARAITT RSGQTLSKIW YNCP 1054 
Gene Ontology
 GO:0005615; C:extracellular space; IDA:MGI.
 GO:0030247; F:polysaccharide binding; IEA:InterPro.
 GO:0005044; F:scavenger receptor activity; IEA:InterPro.
 GO:0071425; P:hematopoietic stem cell proliferation; IMP:MGI.
 GO:0006955; P:immune response; IEA:InterPro.
 GO:0045409; P:negative regulation of interleukin-6 biosynthetic process; IMP:MGI.
 GO:0042127; P:regulation of cell proliferation; IMP:MGI. 
Interpro
 IPR000585; Hemopexin-like_dom.
 IPR018487; Hemopexin-like_repeat.
 IPR018486; Hemopexin_CS.
 IPR020436; Somatomedin_B_chordata.
 IPR001212; Somatomedin_B_dom. 
Pfam
 PF00045; Hemopexin
 PF01033; Somatomedin_B 
SMART
 SM00120; HX
 SM00201; SO 
PROSITE
 PS00024; HEMOPEXIN
 PS51642; HEMOPEXIN_2
 PS00524; SMB_1
 PS50958; SMB_2 
PRINTS
 PR00022; SOMATOMEDINB.