CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037594
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Probable ATP-dependent RNA helicase DDX20 
Protein Synonyms/Alias
  
Gene Name
 DDX20 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
81SVPNQPLKKQIQKIEubiquitination[1]
82VPNQPLKKQIQKIERubiquitination[1]
95ERTLQIQKAHGDHMAubiquitination[1, 2]
127TKQKLPVKSHSECGIubiquitination[1]
142IEKATSPKELGCDRQubiquitination[1]
155RQSEEQMKNSVQTPVubiquitination[2]
173TNSQHQVKEALPVSLubiquitination[1]
216YIKEGLEKPVEIIRHubiquitination[1]
291GSSDNQLKDSESTPVubiquitination[2, 3]
318SDTPNPEKYQESPGIubiquitination[1, 2]
328ESPGIQMKTRLKEGAubiquitination[1, 2, 3, 4]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [4] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 432 AA 
Protein Sequence
MIYYLTFSLL LGTLGLTVTY CCRGEEENMM MRIAQKCNIN LLPLPDPIPS GLMEECVDWD 60
VEVKAAVHTY GIASVPNQPL KKQIQKIERT LQIQKAHGDH MASSRNNSVS GLSVKSKNNT 120
KQKLPVKSHS ECGIIEKATS PKELGCDRQS EEQMKNSVQT PVENSTNSQH QVKEALPVSL 180
PQIPCLSSFK IHQPYTLTFA ELVEDYEHYI KEGLEKPVEI IRHYTGPGDQ TVNPQNGFVR 240
NKVIEQRVPV LASSSQSGDS ESDSDSYSSR TSSQSKGNKS YLEGSSDNQL KDSESTPVDD 300
RISLEQPPNG SDTPNPEKYQ ESPGIQMKTR LKEGASQRAK QSRRNLPRRS SFRLQTEAQE 360
DDWYDCHREI RLSFSDTYQD YEEYWRAYYR AWQEYYAAAS HSYYWNAQRH PSWMAAYHMN 420
TIYLQEMMHS NQ 432 
Gene Ontology
  
Interpro
  
Pfam
  
SMART
  
PROSITE
  
PRINTS